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TRHDE-AS1 TRHDE antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 283392, updated on 23-Nov-2021

Summary

Official Symbol
TRHDE-AS1provided by HGNC
Official Full Name
TRHDE antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:27471
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in fat (RPKM 15.0), kidney (RPKM 3.3) and 4 other tissues See more
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Genomic context

See TRHDE-AS1 in Genome Data Viewer
Location:
12q21.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (72253507..72273509, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (72647287..72667289, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 15 Neighboring gene MRS2 pseudogene 2 Neighboring gene Sharpr-MPRA regulatory region 15256 Neighboring gene tryptophan hydroxylase 2 Neighboring gene thyrotropin releasing hormone degrading enzyme Neighboring gene H3 histone pseudogene 35 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • TRHDE antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026836.1 RNA Sequence

    Status: PREDICTED

    Description
    Transcript Variant: This variant (2) uses an alternate 5' and 3' splice pattern, compared to variant 1.
    Source sequence(s)
    AC087886, BC040230, DA024500
  2. NR_026837.1 RNA Sequence

    Status: PREDICTED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AA868510, AC087886, AK095156, DA024500, DA139014, DR005853

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    72253507..72273509 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001025457.1: Suppressed sequence

    Description
    NM_001025457.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
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