Format

Send to:

Choose Destination

C1RL-AS1 C1RL antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 283314, updated on 23-Nov-2021

Summary

Official Symbol
C1RL-AS1provided by HGNC
Official Full Name
C1RL antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:27461
See related
Ensembl:ENSG00000205885
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MATL2963
Expression
Ubiquitous expression in spleen (RPKM 4.3), lymph node (RPKM 3.2) and 25 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See C1RL-AS1 in Genome Data Viewer
Location:
12p13.31
Exon count:
12
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (7108308..7121851)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (7260904..7274447)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 13442 Neighboring gene complement C1r Neighboring gene complement C1r subcomponent like Neighboring gene RNA, U6 small nuclear 485, pseudogene Neighboring gene retinol binding protein 5 Neighboring gene calsyntenin 3 Neighboring gene peroxisomal biogenesis factor 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • ABC12-49244600F4.3
  • C1RL antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026947.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AC233309, AL833364
    Related
    ENST00000541775.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    7108308..7121851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_021160008.1 Reference GRCh38.p13 PATCHES

    Range
    35994..49537
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center