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PGM2L1 phosphoglucomutase 2 like 1 [ Homo sapiens (human) ]

Gene ID: 283209, updated on 12-Aug-2018

Summary

Official Symbol
PGM2L1provided by HGNC
Official Full Name
phosphoglucomutase 2 like 1provided by HGNC
Primary source
HGNC:HGNC:20898
See related
Ensembl:ENSG00000165434 MIM:611610; Vega:OTTHUMG00000168132
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
BM32A; PMMLP
Expression
Biased expression in brain (RPKM 28.2), endometrium (RPKM 3.0) and 7 other tissues See more
Orthologs

Genomic context

See PGM2L1 in Genome Data Viewer
Location:
11q13.4
Exon count:
15
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 11 NC_000011.10 (74330312..74398751, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (74041361..74109502, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene protein phosphatase methylesterase 1 Neighboring gene uncharacterized LOC105369383 Neighboring gene prolyl 4-hydroxylase subunit alpha 3 Neighboring gene P4HA3 antisense RNA 1 Neighboring gene uncharacterized LOC112268078 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 40 Neighboring gene microRNA 548al Neighboring gene potassium voltage-gated channel subfamily E regulatory subunit 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ32029, FLJ33458, MGC71501

Gene Ontology Provided by GOA

Function Evidence Code Pubs
glucose-1,6-bisphosphate synthase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
glucose-1,6-bisphosphate synthase activity IDA
Inferred from Direct Assay
more info
PubMed 
glucose-1,6-bisphosphate synthase activity TAS
Traceable Author Statement
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
phosphoglucomutase activity EXP
Inferred from Experiment
more info
PubMed 
Process Evidence Code Pubs
canonical glycolysis TAS
Traceable Author Statement
more info
 
galactose catabolic process TAS
Traceable Author Statement
more info
 
glycogen biosynthetic process TAS
Traceable Author Statement
more info
 
glycogen catabolic process TAS
Traceable Author Statement
more info
 
Component Evidence Code Pubs
cytosol TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
glucose 1,6-bisphosphate synthase
NP_775853.2
XP_011543255.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173582.4NP_775853.2  glucose 1,6-bisphosphate synthase

    See identical proteins and their annotated locations for NP_775853.2

    Status: VALIDATED

    Source sequence(s)
    AA775810, AB019210, AK090777, AL119265, AL134388, AP001085, BG430351, DA308228, DA392782, DB170848, DN991760
    Consensus CDS
    CCDS8231.1
    UniProtKB/Swiss-Prot
    Q6PCE3
    Related
    ENSP00000298198.4, OTTHUMP00000238019, ENST00000298198.4, OTTHUMT00000398324
    Conserved Domains (2) summary
    cd05799
    Location:64607
    PGM2; This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and ...
    PTZ00150
    Location:24621
    PTZ00150; phosphoglucomutase-2-like protein; Provisional

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p12 Primary Assembly

    Range
    74330312..74398751 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011544953.3XP_011543255.1  glucose 1,6-bisphosphate synthase isoform X1

    Conserved Domains (2) summary
    cd05799
    Location:85628
    PGM2; This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and ...
    PTZ00150
    Location:24642
    PTZ00150; phosphoglucomutase-2-like protein; Provisional
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