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B3GAT1-DT B3GAT1 divergent transcript [ Homo sapiens (human) ]

Gene ID: 283177, updated on 10-Dec-2022

Summary

Official Symbol
B3GAT1-DTprovided by HGNC
Official Full Name
B3GAT1 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:27449
See related
Ensembl:ENSG00000255545 AllianceGenome:HGNC:27449
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in kidney (RPKM 1.1), small intestine (RPKM 1.1) and 13 other tissues See more
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Genomic context

See B3GAT1-DT in Genome Data Viewer
Location:
11q25
Exon count:
6
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (134436482..134505661)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (134478514..134548064)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (134306376..134375555)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902798 Neighboring gene beta-1,3-glucuronyltransferase 1 Neighboring gene uncharacterized LOC124902799 Neighboring gene uncharacterized LOC105369583

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033852.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AP003971, AP004608
    Related
    ENST00000531319.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    134436482..134505661
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    134478514..134548064
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)