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CCDC153 coiled-coil domain containing 153 [ Homo sapiens (human) ]

Gene ID: 283152, updated on 5-Jan-2022

Summary

Official Symbol
CCDC153provided by HGNC
Official Full Name
coiled-coil domain containing 153provided by HGNC
Primary source
HGNC:HGNC:27446
See related
Ensembl:ENSG00000248712
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Enables identical protein binding activity. [provided by Alliance of Genome Resources, Nov 2021]
Expression
Broad expression in testis (RPKM 1.3), lung (RPKM 0.8) and 23 other tissues See more
Orthologs
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Genomic context

See CCDC153 in Genome Data Viewer
Location:
11q23.3
Exon count:
7
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (119190254..119195841, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (119060347..119066551, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene NLR family member X1 Neighboring gene Sharpr-MPRA regulatory region 11099 Neighboring gene small nucleolar RNA, C/D box 150 Neighboring gene PDZ domain containing 3 Neighboring gene fragile site, folic acid type, rare, fra(11)(q23.3) Neighboring gene Cbl proto-oncogene Neighboring gene RNA, U6 small nuclear 262, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC125447, MGC125448

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
coiled-coil domain-containing protein 153

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001145018.3NP_001138490.1  coiled-coil domain-containing protein 153

    See identical proteins and their annotated locations for NP_001138490.1

    Status: VALIDATED

    Source sequence(s)
    AA782908, AA909102, AP002956
    Consensus CDS
    CCDS44753.1
    UniProtKB/Swiss-Prot
    Q494R4
    Related
    ENSP00000423567.2, ENST00000503566.7
    Conserved Domains (1) summary
    TIGR02169
    Location:30187
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    119190254..119195841 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001033658.1: Suppressed sequence

    Description
    NM_001033658.1: This RefSeq was permanently suppressed because the CDS was partial.
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