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OR52Z1P olfactory receptor family 52 subfamily Z member 1 pseudogene [ Homo sapiens (human) ]

Gene ID: 283110, updated on 22-Sep-2022

Summary

Official Symbol
OR52Z1Pprovided by HGNC
Official Full Name
olfactory receptor family 52 subfamily Z member 1 pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:19596
See related
Ensembl:ENSG00000176748 AllianceGenome:HGNC:19596
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
OR52Z1
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. This olfactory receptor gene is a segregating pseudogene, where some individuals have an allele that encodes a functional olfactory receptor, while other individuals have an allele encoding a protein that is predicted to be non-functional. [provided by RefSeq, Jan 2017]
Annotation information
Note: Genetic polymorphisms result in both protein coding and non-coding alleles of this gene.
Orthologs
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Genomic context

See OR52Z1P in Genome Data Viewer
Location:
11p15.4
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (5177714..5178664, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (5237038..5237993, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (5198944..5199894, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene hereditary persistence of fetal hemoglobin-1 and -2 3' breakpoint enhancers Neighboring gene olfactory receptor family 52 subfamily A member 1 Neighboring gene hereditary persistence of fetal hemoglobin-6 3' breakpoint enhancer Neighboring gene olfactory receptor family 51 subfamily A member 1 pseudogene Neighboring gene hereditary persistence of fetal hemoglobin-3 3' breakpoint enhancer Neighboring gene olfactory receptor family 51 subfamily V member 1

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Other Names

  • Olfactory receptor 52Z1
  • odorant receptor HOR3'beta2
  • olfactory receptor, family 52, subfamily Z, member 1

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_172914.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC129505
    Related
    ENST00000510471.3

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    5177714..5178664 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    5237038..5237993 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_004304.6: Suppressed sequence

    Description
    NG_004304.6: This RefSeq was removed because it is now thought that this gene does encode a protein.
  2. NG_071173.1: Suppressed sequence

    Description
    NG_071173.1: This RefSeq was removed because it is now thought that this gene is a transcribed pseudogene.
  3. NM_001348257.1: Suppressed sequence

    Description
    NM_001348257.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.