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BPIFB1 BPI fold containing family B member 1 [ Bos taurus (domestic cattle) ]

Gene ID: 282643, updated on 17-Aug-2024

Summary

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Official Symbol
BPIFB1provided by VGNC
Official Full Name
BPI fold containing family B member 1provided by VGNC
Primary source
VGNC:VGNC:26545
See related
Ensembl:ENSBTAG00000015724
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
LPLUNC1; C20orf114; C13H20orf114
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (62762367..62785964)

Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene BPI fold containing family A member 3 Neighboring gene BPI fold containing family A member 1 Neighboring gene U1 small nuclear ribonucleoprotein 70 kDa-like Neighboring gene BPI fold containing family B, member 5 Neighboring gene CDK5 regulatory subunit associated protein 1 Neighboring gene transfer RNA glycine (anticodon CCC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The BSP30 salivary proteins from cattle, LUNX/PLUNC and von Ebner's minor salivary gland protein are members of the PSP/LBP superfamily of proteins. Wheeler TT, et al. Biochim Biophys Acta, 2002 Dec 12. PMID 12427544
  2. Phylogenetic and evolutionary analysis of the PLUNC gene family. Bingle CD, et al. Protein Sci, 2004 Feb. PMID 14739326, Free PMC Article
  3. Distant cousins: genomic and sequence diversity within the BPI fold-containing (BPIF)/PLUNC protein family. Bingle CD, et al. Biochem Soc Trans, 2011 Aug. PMID 21787330
  4. Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. Bingle CD, et al. Biochem Soc Trans, 2011 Aug. PMID 21787333, Free PMC Article
  5. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC142624

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BPI fold-containing family B member 1
Names
VEMSGP
long palate, lung and nasal epithelium carcinoma-associated protein 1
von Ebner minor salivary gland protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_174697.2 → NP_777122.1  BPI fold-containing family B member 1 precursor

    See identical proteins and their annotated locations for NP_777122.1

    Status: PROVISIONAL

    Source sequence(s)
    AF488705
    UniProtKB/Swiss-Prot
    Q08DT9, Q8SPF8
    UniProtKB/TrEMBL
    A0AAA9SW61
    Related
    ENSBTAP00000020875.5, ENSBTAT00000020875.7
    Conserved Domains (2) summary
    cd00025
    Location:26 → 259
    BPI1; BPI/LBP/CETP N-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...
    cd00026
    Location:277 → 473
    BPI2; BPI/LBP/CETP C-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) C-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    62762367..62785964
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005214500.5 → XP_005214557.4  BPI fold-containing family B member 1 isoform X1

    UniProtKB/TrEMBL
    A0AAA9SW61, F1MLW2
    Conserved Domains (2) summary
    cd00025
    Location:26 → 259
    BPI1; BPI/LBP/CETP N-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...
    cd00026
    Location:277 → 473
    BPI2; BPI/LBP/CETP C-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) C-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...

  2. XM_025000324.2 → XP_024856092.1  BPI fold-containing family B member 1 isoform X2

    Conserved Domains (2) summary
    cd00025
    Location:9 → 183
    BPI1; BPI/LBP/CETP N-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...
    cd00026
    Location:201 → 397
    BPI2; BPI/LBP/CETP C-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) C-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8SPF8.1 GenPept UniProtKB/Swiss-Prot:Q8SPF8

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