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COL9A1 collagen type IX alpha 1 chain [ Bos taurus (cattle) ]

Gene ID: 282195, updated on 5-Mar-2024

Summary

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Official Symbol
COL9A1provided by VGNC
Official Full Name
collagen type IX alpha 1 chainprovided by VGNC
Primary source
VGNC:VGNC:53787
See related
BGD:BT11295; Ensembl:ENSBTAG00000035054
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
39
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (9301186..9391763, complement)

Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene LMBR1 domain containing 1 Neighboring gene uncharacterized LOC104969496 Neighboring gene collagen type XIX alpha 1 chain Neighboring gene uncharacterized LOC132346193 Neighboring gene U4 spliceosomal RNA Neighboring gene histone H2B type 1-L

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
collagen alpha-1(IX) chain
Names
collagen, type IX, alpha 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    9301186..9391763 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059890025.1 → XP_059746008.1  collagen alpha-1(IX) chain

    Related
    ENSBTAP00000074951.1, ENSBTAT00000098730.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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