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mutY A/G-specific adenine glycosylase [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2796692, updated on 14-Apr-2016

Summary

Gene symbol
mutY
Gene description
A/G-specific adenine glycosylase
Locus tag
DVU0282
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (327314..328435, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene glycosyl transferase family protein Neighboring gene exopolysaccharide biosynthesis protein Neighboring gene AhpF family protein/thioredoxin reductase Neighboring gene peptidyl-prolyl cis-trans isomerase B

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Base excision repair, organism-specific biosystem (from KEGG)
    Base excision repair, organism-specific biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • Base excision repair, conserved biosystem (from KEGG)
    Base excision repair, conserved biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...

General protein information

Names
A/G-specific adenine glycosylase
YP_009506.1
  • identified by match to protein family HMM PF00293; match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01084

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    327314..328435 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009506.1 A/G-specific adenine glycosylase [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009506.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72FD2
    Conserved Domains (3) summary
    COG1194
    Location:9364
    MutY; Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs [Replication, recombination and repair]
    cd00056
    Location:37194
    ENDO3c; endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases
    cd03425
    Location:236365
    MutT_pyrophosphohydrolase; The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic ...
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