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DVU1190 sensory box protein [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2796590, updated on 20-Aug-2016

Summary

Gene symbol
DVU1190
Gene description
sensory box protein
Locus tag
DVU1190
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (1278751..1281531)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene ATP-dependent protease La Neighboring gene acylphosphatase Neighboring gene DNA repair protein RadC

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
sensory box protein
YP_010409.1
  • identified by match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    1278751..1281531
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_010409.1 sensory box protein [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_010409.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72CU3
    Conserved Domains (5) summary
    cd01949
    Location:494653
    GGDEF; Diguanylate-cyclase (DGC) or GGDEF domain
    cd00130
    Location:376479
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    cd01948
    Location:671910
    EAL; EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second ...
    TIGR00229
    Location:365489
    sensory_box; PAS domain S-box
    pfam13185
    Location:213353
    GAF_2; GAF domain
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