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DVU0100 TonB-dependent receptor [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2796546, updated on 20-Aug-2016

Summary

Gene symbol
DVU0100
Gene description
TonB-dependent receptor
Locus tag
DVU0100
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (131347..133296)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene polyamine ABC transporter permease Neighboring gene putrescine/spermidine ABC transporter ATPase Neighboring gene TonB domain-containing protein Neighboring gene UbiE/COQ5 family methlytransferase Neighboring gene cation ABC transporter periplasmic binding protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
TonB-dependent receptor
YP_009325.1
  • identified by match to protein family HMM PF00593

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    131347..133296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009325.1 TonB-dependent receptor [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009325.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72FW3
    Conserved Domains (2) summary
    COG4206
    Location:59649
    BtuB; Outer membrane cobalamin receptor protein [Coenzyme transport and metabolism]
    cl21487
    Location:59649
    OM_channels; Porin superfamily. These outer membrane channels share a beta-barrel structure that differ in strand and shear number. Classical (gram-negative ) porins are non-specific channels for small hydrophillic molecules and form 16 beta-stranded barrels (16,20) ...
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