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DVU2827 sigma-54 dependent transcriptional regulator [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2796381, updated on 20-Aug-2016

Summary

Gene symbol
DVU2827
Gene description
sigma-54 dependent transcriptional regulator
Locus tag
DVU2827
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (2934393..2935814)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene pyruvate formate-lyase 1 activating enzyme Neighboring gene hypothetical protein Neighboring gene phage integrase site specific recombinase Neighboring gene hypothetical protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
sigma-54 dependent transcriptional regulator
YP_012039.1
  • identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM TIGR00229; match to protein family HMM TIGR01199

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    2934393..2935814
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_012039.1 sigma-54 dependent transcriptional regulator [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_012039.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q727M8
    Conserved Domains (4) summary
    smart00091
    Location:664
    PAS; PAS domain
    TIGR01817
    Location:4442
    nifA; Nif-specific regulatory protein
    pfam00158
    Location:149316
    Sigma54_activat; Sigma-54 interaction domain
    pfam02954
    Location:419455
    HTH_8; Bacterial regulatory protein, Fis family
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