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potB polyamine ABC transporter permease [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2796177, updated on 20-Aug-2016

Summary

Gene symbol
potB
Gene description
polyamine ABC transporter permease
Locus tag
DVU0097
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (127492..128379, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene polyamine ABC transporter periplasmic polyamine-binding protein Neighboring gene spermidine/putrescine ABC transporter Neighboring gene putrescine/spermidine ABC transporter ATPase Neighboring gene TonB domain-containing protein Neighboring gene TonB-dependent receptor

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • ABC transporters, organism-specific biosystem (from KEGG)
    ABC transporters, organism-specific biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • ABC transporters, conserved biosystem (from KEGG)
    ABC transporters, conserved biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • Spermidine/putrescine transport system, organism-specific biosystem (from KEGG)
    Spermidine/putrescine transport system, organism-specific biosystemStructural complex; Environmental information processing; Mineral and organic ion transport system
  • Spermidine/putrescine transport system, conserved biosystem (from KEGG)
    Spermidine/putrescine transport system, conserved biosystemStructural complex; Environmental information processing; Mineral and organic ion transport system

General protein information

Names
polyamine ABC transporter permease
YP_009322.1
  • identified by similarity to SP:P23860; match to protein family HMM PF00528

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    127492..128379 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009322.1 polyamine ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009322.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72FW6
    Conserved Domains (1) summary
    cl00427
    Location:1276
    TM_PBP2; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and ...
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