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potC spermidine/putrescine ABC transporter [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2796176, updated on 20-Aug-2016

Summary

Gene symbol
potC
Gene description
spermidine/putrescine ABC transporter
Locus tag
DVU0096
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (126716..127489, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene methyl-accepting chemotaxis protein Neighboring gene polyamine ABC transporter periplasmic polyamine-binding protein Neighboring gene polyamine ABC transporter permease Neighboring gene putrescine/spermidine ABC transporter ATPase Neighboring gene TonB domain-containing protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • ABC transporters, organism-specific biosystem (from KEGG)
    ABC transporters, organism-specific biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • ABC transporters, conserved biosystem (from KEGG)
    ABC transporters, conserved biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • Spermidine/putrescine transport system, organism-specific biosystem (from KEGG)
    Spermidine/putrescine transport system, organism-specific biosystemStructural complex; Environmental information processing; Mineral and organic ion transport system
  • Spermidine/putrescine transport system, conserved biosystem (from KEGG)
    Spermidine/putrescine transport system, conserved biosystemStructural complex; Environmental information processing; Mineral and organic ion transport system

General protein information

Names
spermidine/putrescine ABC transporter
YP_009321.1
  • can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    126716..127489 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009321.1 spermidine/putrescine ABC transporter [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009321.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72FW7
    Conserved Domains (2) summary
    PRK09500
    Location:2257
    potC; spermidine/putrescine ABC transporter membrane protein; Reviewed
    cl00427
    Location:15248
    TM_PBP2; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and ...
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