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DVU0060 RND family efflux transporter MFP subunit [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2796165, updated on 20-Aug-2016

Summary

Gene symbol
DVU0060
Gene description
RND family efflux transporter MFP subunit
Locus tag
DVU0060
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (69540..70724)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene TetR family transcriptional regulator Neighboring gene RND family efflux transporter MFP subunit Neighboring gene AcrB/AcrD/AcrF family protein Neighboring gene multidrug resistance protein Neighboring gene RND efflux system outer membrane lipoprotein Neighboring gene MarR family transcriptional regulator

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Cationic antimicrobial peptide (CAMP) resistance, organism-specific biosystem (from KEGG)
    Cationic antimicrobial peptide (CAMP) resistance, organism-specific biosystemCationic antimicrobial peptides (CAMPs) play an important role in host defense against microbial infection and are key components of the innate immune response. These are found among all classes of l...
  • Cationic antimicrobial peptide (CAMP) resistance, conserved biosystem (from KEGG)
    Cationic antimicrobial peptide (CAMP) resistance, conserved biosystemCationic antimicrobial peptides (CAMPs) play an important role in host defense against microbial infection and are key components of the innate immune response. These are found among all classes of l...
  • beta-Lactam resistance, organism-specific biosystem (from KEGG)
    beta-Lactam resistance, organism-specific biosystemThe beta-lactam antibiotics are the most widely used group of antibiotics, which exert their effect by interfering with the structural crosslinking of peptidoglycans in bacterial cell walls. Over the...
  • beta-Lactam resistance, conserved biosystem (from KEGG)
    beta-Lactam resistance, conserved biosystemThe beta-lactam antibiotics are the most widely used group of antibiotics, which exert their effect by interfering with the structural crosslinking of peptidoglycans in bacterial cell walls. Over the...

General protein information

Names
RND family efflux transporter MFP subunit
YP_009285.1
  • identified by similarity to SP:P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    69540..70724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009285.1 RND family efflux transporter MFP subunit [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009285.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72G03
    Conserved Domains (4) summary
    PRK09578
    Location:4376
    PRK09578; periplasmic multidrug efflux lipoprotein precursor; Reviewed
    pfam13533
    Location:67114
    Biotin_lipoyl_2; Biotin-lipoyl like
    cl01147
    Location:91151
    DUF615; Protein of unknown function (DUF615)
    cl11404
    Location:179286
    Biotinyl_lipoyl_domains; Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl, ...
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