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birA birA bifunctional protein [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2796131, updated on 20-Aug-2016

Summary

Gene symbol
birA
Gene description
birA bifunctional protein
Locus tag
DVU2557
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (2668667..2669659, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene MATE efflux family protein Neighboring gene hypothetical protein Neighboring gene biotin synthase Neighboring gene adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA Neighboring gene hypothetical protein Neighboring gene short chain dehydrogenase/reductase oxidoreductase

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Biotin metabolism, organism-specific biosystem (from KEGG)
    Biotin metabolism, organism-specific biosystemBiotin (vitamin H or vitamin B7) is the essential cofactor of biotin-dependent carboxylases, such as pyruvate carboxylase and acetyl-CoA carboxylase. Mammals cannot synthesize biotin, while in bacter...
  • Biotin metabolism, conserved biosystem (from KEGG)
    Biotin metabolism, conserved biosystemBiotin (vitamin H or vitamin B7) is the essential cofactor of biotin-dependent carboxylases, such as pyruvate carboxylase and acetyl-CoA carboxylase. Mammals cannot synthesize biotin, while in bacter...
  • Metabolic pathways, organism-specific biosystem (from KEGG)
    Metabolic pathways, organism-specific biosystem
    Metabolic pathways

General protein information

Names
birA bifunctional protein
YP_011769.1
  • identified by match to protein family HMM PF03099; match to protein family HMM TIGR00121

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    2668667..2669659 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_011769.1 birA bifunctional protein [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_011769.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q728P6
    Conserved Domains (4) summary
    COG0340
    Location:93329
    BirA2; Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme transport and metabolism]
    pfam02237
    Location:283326
    BPL_C; Biotin protein ligase C terminal domain
    cl14057
    Location:94243
    BPL_LplA_LipB; Biotin/lipoate A/B protein ligase family
    cl21459
    Location:864
    HTH; Helix-turn-helix domains
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