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livM high-affinity branched chain amino acid ABC transporter permease [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2795944, updated on 14-Apr-2016

Summary

Gene symbol
livM
Gene description
high-affinity branched chain amino acid ABC transporter permease
Locus tag
DVU2742
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (2847425..2848501, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene ABC transporter ATP-binding protein Neighboring gene ABC transporter ATP-binding protein Neighboring gene high-affinity branched-chain amino acid ABC ransporter, permease Neighboring gene high-affinity branched-chain amino acid ABC transporter perisplasmic amino acid binding protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • ABC transporters, organism-specific biosystem (from KEGG)
    ABC transporters, organism-specific biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • ABC transporters, conserved biosystem (from KEGG)
    ABC transporters, conserved biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • Branched-chain amino acid transport system, organism-specific biosystem (from KEGG)
    Branched-chain amino acid transport system, organism-specific biosystemStructural complex; Environmental information processing; Phosphate and amino acid transport system
  • Branched-chain amino acid transport system, conserved biosystem (from KEGG)
    Branched-chain amino acid transport system, conserved biosystemStructural complex; Environmental information processing; Phosphate and amino acid transport system
  • Quorum sensing, organism-specific biosystem (from KEGG)
    Quorum sensing, organism-specific biosystemQuorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal mol...
  • Quorum sensing, conserved biosystem (from KEGG)
    Quorum sensing, conserved biosystemQuorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal mol...

General protein information

Names
high-affinity branched chain amino acid ABC transporter permease
YP_011954.1
  • identified by similarity to SP:P22729; match to protein family HMM PF02653

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    2847425..2848501 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_011954.1 high-affinity branched chain amino acid ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_011954.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q727W2
    Conserved Domains (1) summary
    cd06581
    Location:37340
    TM_PBP1_LivM_like; Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of ...
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