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DVU0182 radical SAM domain-containing protein [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2795645, updated on 20-Aug-2016

Summary

Gene symbol
DVU0182
Gene description
radical SAM domain-containing protein
Locus tag
DVU0182
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (226416..227339, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene fused molybdenum-pterin binding domain-containing protein/site-specific recombinase phage integrase Neighboring gene molybdenum ABC transporter ATP-binding protein Neighboring gene molybdenum ABC transporter permease Neighboring gene methyl-accepting chemotaxis protein Neighboring gene hypothetical protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
radical SAM domain-containing protein
YP_009407.1
  • identified by match to protein family HMM PF04055

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    226416..227339 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009407.1 radical SAM domain-containing protein [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009407.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72FN1
    Conserved Domains (3) summary
    cd01335
    Location:43202
    Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
    TIGR04311
    Location:31305
    rSAM_Geo_metal; putative metalloenzyme radical SAM/SPASM domain maturase
    pfam13186
    Location:239306
    SPASM; Iron-sulfur cluster-binding domain
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