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murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2795636, updated on 20-Aug-2016

Summary

Gene symbol
murF
Gene description
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
Locus tag
DVU2508
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (2620270..2621706, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene cell cycle protein FtsW Neighboring gene UDP-N-acetylmuramoylalanine--D-glutamate ligase Neighboring gene phospho-N-acetylmuramoyl-pentapeptide-transferase Neighboring gene UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase Neighboring gene penicillin-binding protein Neighboring gene hypothetical protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General protein information

Names
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_011720.1
  • identified by similarity to SP:P11880; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01143

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    2620270..2621706 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_011720.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_011720.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q728U4
    Conserved Domains (3) summary
    TIGR01143
    Location:32465
    murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
    pfam01225
    Location:32103
    Mur_ligase; Mur ligase family, catalytic domain
    pfam08245
    Location:113299
    Mur_ligase_M; Mur ligase middle domain
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