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murD UDP-N-acetylmuramoylalanine--D-glutamate ligase [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2795634, updated on 20-Aug-2016

Summary

Gene symbol
murD
Gene description
UDP-N-acetylmuramoylalanine--D-glutamate ligase
Locus tag
DVU2506
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (2617887..2619188, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase Neighboring gene cell cycle protein FtsW Neighboring gene phospho-N-acetylmuramoyl-pentapeptide-transferase Neighboring gene UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Neighboring gene UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase Neighboring gene penicillin-binding protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General protein information

Names
UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_011718.1
  • identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01087

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    2617887..2619188 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_011718.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_011718.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q728U6
    Conserved Domains (4) summary
    COG0771
    Location:18433
    MurD; UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]
    pfam02875
    Location:296364
    Mur_ligase_C; Mur ligase family, glutamate ligase domain
    pfam08245
    Location:123227
    Mur_ligase_M; Mur ligase middle domain
    cl21454
    Location:1048
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
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