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recJ single-stranded-DNA-specific exonuclease RecJ [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2795414, updated on 20-Aug-2016

Summary

Gene symbol
recJ
Gene description
single-stranded-DNA-specific exonuclease RecJ
Locus tag
DVU0904
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (995665..997380)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene HD domain-containing protein Neighboring gene lipoyl synthase Neighboring gene lipoate-protein ligase B Neighboring gene hypothetical protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Base excision repair, organism-specific biosystem (from KEGG)
    Base excision repair, organism-specific biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • Base excision repair, conserved biosystem (from KEGG)
    Base excision repair, conserved biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • Homologous recombination, organism-specific biosystem (from KEGG)
    Homologous recombination, organism-specific biosystemHomologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves...
  • Homologous recombination, conserved biosystem (from KEGG)
    Homologous recombination, conserved biosystemHomologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves...
  • Mismatch repair, organism-specific biosystem (from KEGG)
    Mismatch repair, organism-specific biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
  • Mismatch repair, conserved biosystem (from KEGG)
    Mismatch repair, conserved biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...

General protein information

Names
single-stranded-DNA-specific exonuclease RecJ
YP_010125.1
  • identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    995665..997380
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_010125.1 single-stranded-DNA-specific exonuclease RecJ [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_010125.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72DM5
    Conserved Domains (3) summary
    TIGR00644
    Location:41567
    recJ; single-stranded-DNA-specific exonuclease RecJ
    pfam01368
    Location:85232
    DHH; DHH family
    pfam02272
    Location:377440
    DHHA1; DHHA1 domain
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