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DVU2246 S1 RNA-binding domain-containing protein [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2795398, updated on 20-Aug-2016

Summary

Gene symbol
DVU2246
Gene description
S1 RNA-binding domain-containing protein
Locus tag
DVU2246
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (2341713..2343884)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene mutT/nudix family protein Neighboring gene hypothetical protein Neighboring gene anti-oxidant AhpCTSA family protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
S1 RNA-binding domain-containing protein
YP_011459.1
  • identified by match to protein family HMM PF00575

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    2341713..2343884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_011459.1 S1 RNA-binding domain-containing protein [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_011459.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q729V2
    Conserved Domains (6) summary
    COG2183
    Location:8717
    Tex; Transcriptional accessory protein Tex/SPT6 [Transcription]
    cd05685
    Location:648715
    S1_Tex; S1_Tex: The C-terminal S1 domain of a transcription accessory factor called Tex, which has been characterized in Bordetella pertussis and Pseudomonas aeruginosa. The tex gene is essential in Bortella pertusis and is named for its role in toxin expression. ...
    pfam09371
    Location:15203
    Tex_N; Tex-like protein N-terminal domain
    pfam12836
    Location:490552
    HHH_3; Helix-hairpin-helix motif
    pfam14878
    Location:560632
    DLD; Death-like domain of SPT6
    pfam16921
    Location:326447
    Tex_YqgF; Tex protein YqgF-like domain
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