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DVU2299 glycine betaine/L-proline ABC transporter ATP-binding protein [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2795345, updated on 20-Aug-2016

Summary

Gene symbol
DVU2299
Gene description
glycine betaine/L-proline ABC transporter ATP-binding protein
Locus tag
DVU2299
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (2392994..2394187, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene monofunctional biosynthetic peptidoglycan transglycosylase Neighboring gene glycine betaine/L-proline ABC transporter substrate-binding protein Neighboring gene glycine/betaine/L-proline ABC transporter permease Neighboring gene hypothetical protein Neighboring gene lipoprotein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • ABC transporters, organism-specific biosystem (from KEGG)
    ABC transporters, organism-specific biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • ABC transporters, conserved biosystem (from KEGG)
    ABC transporters, conserved biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • Glycine betaine/proline transport system, organism-specific biosystem (from KEGG)
    Glycine betaine/proline transport system, organism-specific biosystemStructural complex; Environmental information processing; Mineral and organic ion transport system
  • Glycine betaine/proline transport system, conserved biosystem (from KEGG)
    Glycine betaine/proline transport system, conserved biosystemStructural complex; Environmental information processing; Mineral and organic ion transport system

General protein information

Names
glycine betaine/L-proline ABC transporter ATP-binding protein
YP_011512.1
  • identified by similarity to SP:P17328; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    2392994..2394187 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_011512.1 glycine betaine/L-proline ABC transporter ATP-binding protein [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_011512.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q729Q1
    Conserved Domains (3) summary
    cd03294
    Location:4272
    ABC_Pro_Gly_Betaine; ATP-binding cassette domain of the osmoprotectant proline/glycine betaine uptake system
    COG4175
    Location:1394
    ProV; ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
    cl15354
    Location:284389
    CBS_pair; The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called ...
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