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DVU2462 oligopeptide ABC transporter permease [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2795326, updated on 30-Jan-2018

Summary

Gene symbol
DVU2462
Gene description
oligopeptide ABC transporter permease
Locus tag
DVU2462
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (2567205..2568107)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene oligopeptide ABC transporter permease Neighboring gene DNA repair protein RecN Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Peptides/nickel transport system, organism-specific biosystem (from KEGG)
    Peptides/nickel transport system, organism-specific biosystemStructural complex; Environmental information processing; Peptide and nickel transport system
  • Peptides/nickel transport system, conserved biosystem (from KEGG)
    Peptides/nickel transport system, conserved biosystemStructural complex; Environmental information processing; Peptide and nickel transport system
  • Quorum sensing, organism-specific biosystem (from KEGG)
    Quorum sensing, organism-specific biosystemQuorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal mol...
  • Quorum sensing, conserved biosystem (from KEGG)
    Quorum sensing, conserved biosystemQuorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal mol...

General protein information

Names
oligopeptide ABC transporter permease
YP_011674.1
  • identified by similarity to SP:P42063; match to protein family HMM PF00528

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    2567205..2568107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_011674.1 oligopeptide ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_011674.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q728Z0
    Conserved Domains (3) summary
    cd06261
    Location:98280
    TM_PBP2; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and ...
    COG1173
    Location:15300
    DppC; ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism]
    pfam12911
    Location:3475
    OppC_N; N-terminal TM domain of oligopeptide transport permease C
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