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gyrB DNA gyrase subunit B [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2794972, updated on 20-Aug-2016

Summary

Gene symbol
gyrB
Gene description
DNA gyrase subunit B
Locus tag
DVU0003
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (2766..5162)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene chromosomal replication initiator protein DnaA Neighboring gene DNA polymerase III subunit beta Neighboring gene DNA gyrase subunit A Neighboring gene lipoprotein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
DNA gyrase subunit B
YP_009228.1
  • identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF02518; match to protein family HMM TIGR01059

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    2766..5162
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009228.1 DNA gyrase subunit B [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009228.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72G57
    Conserved Domains (5) summary
    cd03366
    Location:421535
    TOPRIM_TopoIIA_GyrB; TOPRIM_TopoIIA_GyrB: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in proteins of the type IIA family of DNA topoisomerases similar to the Escherichia coli GyrB subunit. TopoIIA enzymes cut both strands of the ...
    smart00387
    Location:34177
    HATPase_c; Histidine kinase-like ATPases
    PRK14939
    Location:7798
    gyrB; DNA gyrase subunit B; Provisional
    cd00822
    Location:222379
    TopoII_Trans_DNA_gyrase; TopoIIA_Trans_DNA_gyrase: Transducer domain, having a ribosomal S5 domain 2-like fold, of the type found in proteins of the type IIA family of DNA topoisomerases similar to the B subunits of E. coli DNA gyrase and E. coli Topoisomerase IV which are ...
    pfam00986
    Location:725786
    DNA_gyraseB_C; DNA gyrase B subunit, carboxyl terminus
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