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DVU0563 ISD1, transposase OrfB [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2794783, updated on 20-Aug-2016

Summary

Gene symbol
DVU0563
Gene description
ISD1, transposase OrfB
Locus tag
DVU0563
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (628675..629499)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene glycosyl transferase family protein Neighboring gene ISD1, transposase OrfA Neighboring gene ISDvu4, transposase, truncation Neighboring gene glyceraldehyde 3-phosphate dehydrogenase Neighboring gene GAF domain-containing protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
ISD1, transposase OrfB
YP_009785.1
  • identified by similarity to GP:2645861; match to protein family HMM PF00665

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    628675..629499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009785.1 ISD1, transposase OrfB [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009785.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72EL5
    Conserved Domains (4) summary
    COG2801
    Location:33264
    Tra5; Transposase InsO and inactivated derivatives [Mobilome: prophages, transposons]
    pfam00665
    Location:107219
    rve; Integrase core domain
    pfam13276
    Location:4791
    HTH_21; HTH-like domain
    pfam13683
    Location:190256
    rve_3; Integrase core domain
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