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DVU0116 polysaccharide deacetylase [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2794720, updated on 14-Apr-2016

Summary

Gene symbol
DVU0116
Gene description
polysaccharide deacetylase
Locus tag
DVU0116
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (149719..150795)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene phosphoribosyl-AMP cyclohydrolase Neighboring gene ATP phosphoribosyltransferase Neighboring gene shikimate 5-dehydrogenase Neighboring gene glycosyl transferase group 2 family protein Neighboring gene sigma-54 dependent transcriptional regulator/response regulator Neighboring gene sensor histidine kinase

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
polysaccharide deacetylase
YP_009341.1
  • identified by match to protein family HMM PF01522

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    149719..150795
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009341.1 polysaccharide deacetylase [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009341.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72FU7
    Conserved Domains (2) summary
    cd10955
    Location:159351
    CE4_BH0857_like; Putative catalytic NodB homology domain of uncharacterized BH0857 protein from Bacillus halodurans and its bacterial homologs
    COG0726
    Location:160352
    CDA1; Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis]
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