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DVU0022 HAMP domain/GGDEF domain/EAL domain-containing protein [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2794596, updated on 20-Aug-2016

Summary

Gene symbol
DVU0022
Gene description
HAMP domain/GGDEF domain/EAL domain-containing protein
Locus tag
DVU0022
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (24857..27238, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene sensory box histidine kinase

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
HAMP domain/GGDEF domain/EAL domain-containing protein
YP_009247.1
  • identified by match to protein family HMM PF00563; match to protein family HMM PF00672; match to protein family HMM PF00990; match to protein family HMM TIGR00254

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    24857..27238 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009247.1 HAMP domain/GGDEF domain/EAL domain-containing protein [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009247.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72G39
    Conserved Domains (3) summary
    cd01949
    Location:351509
    GGDEF; Diguanylate-cyclase (DGC) or GGDEF domain
    cd01948
    Location:528768
    EAL; EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second ...
    pfam00672
    Location:292341
    HAMP; HAMP domain
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