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rluD/coaE ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2794521, updated on 20-Aug-2016

Summary

Gene symbol
rluD/coaE
Gene description
ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase
Locus tag
DVU1024
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (1127477..1129102, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene SUF system FeS assembly ATPase SufC Neighboring gene rhomboid family protein Neighboring gene uracil phosphoribosyltransferase Neighboring gene uracil permease

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase
YP_010245.1
  • identified by similarity to SP:P33643; match to protein family HMM PF00849; match to protein family HMM PF01121; match to protein family HMM PF01479; match to protein family HMM TIGR00005; match to protein family HMM TIGR00152

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    1127477..1129102 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_010245.1 ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_010245.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72DA5
    Conserved Domains (5) summary
    cd02869
    Location:102292
    PseudoU_synth_RluCD_like; Pseudouridine synthase, RsuA/RluD family
    COG0237
    Location:322509
    CoaE; Dephospho-CoA kinase [Coenzyme transport and metabolism]
    COG0564
    Location:16309
    RluA; Pseudouridylate synthase, 23S rRNA- or tRNA-specific [Translation, ribosomal structure and biogenesis]
    cd00165
    Location:26105
    S4; S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged residues that define a likely RNA-binding site; Found in stress proteins, ribosomal proteins and tRNA synthetases; This may imply a hitherto unrecognized ...
    cl17190
    Location:322520
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
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