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DVU0619 sigma-54 dependent transcriptional regulator [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2794405, updated on 20-Aug-2016

Summary

Gene symbol
DVU0619
Gene description
sigma-54 dependent transcriptional regulator
Locus tag
DVU0619
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (684470..685909, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene L-PSP family endoribonuclease Neighboring gene sigma-54 dependent DNA-binding response regulator

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
sigma-54 dependent transcriptional regulator
YP_009841.1
  • identified by match to protein family HMM PF00158; match to protein family HMM TIGR01199

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    684470..685909 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009841.1 sigma-54 dependent transcriptional regulator [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009841.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72EF9
    Conserved Domains (3) summary
    TIGR02974
    Location:155463
    phageshock_pspF; psp operon transcriptional activator PspF
    pfam00158
    Location:155319
    Sigma54_activat; Sigma-54 interaction domain
    cl19078
    Location:41123
    REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
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