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DVU0888 response regulator [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2794200, updated on 20-Aug-2016

Summary

Gene symbol
DVU0888
Gene description
response regulator
Locus tag
DVU0888
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (978190..979902)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene thioesterase Neighboring gene transglycosylase Neighboring gene phosphonopyruvate decarboxylase-like protein Neighboring gene homoserine dehydrogenase Neighboring gene class I/II aminotransferase

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
response regulator
YP_010109.1
  • identified by match to protein family HMM PF00072; match to protein family HMM PF00785; match to protein family HMM PF02518; match to protein family HMM TIGR00229

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    978190..979902
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_010109.1 response regulator [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_010109.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72DP1
    Conserved Domains (7) summary
    smart00387
    Location:480567
    HATPase_c; Histidine kinase-like ATPases
    COG3707
    Location:66229
    AmiR; Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains [Signal transduction mechanisms, Transcription]
    COG3920
    Location:351569
    COG3920; Two-component sensor histidine kinase, HisKA and HATPase domains [Signal transduction mechanisms]
    cd00130
    Location:249354
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    TIGR00229
    Location:238364
    sensory_box; PAS domain S-box
    pfam00072
    Location:73173
    Response_reg; Response regulator receiver domain
    pfam07568
    Location:377452
    HisKA_2; Histidine kinase
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