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DVU0857 12,18-didecarboxysiroheme deacetylase [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2794186, updated on 14-Apr-2016

Summary

Gene symbol
DVU0857
Gene description
12,18-didecarboxysiroheme deacetylase
Locus tag
DVU0857
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (946761..947942, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene radical SAM domain-containing protein Neighboring gene delta-aminolevulinic acid dehydratase Neighboring gene lipoprotein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
12,18-didecarboxysiroheme deacetylase
YP_010078.1
  • identified by match to protein family HMM PF04055

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    946761..947942 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_010078.1 radical SAM domain-containing protein [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_010078.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72DS2
    Conserved Domains (3) summary
    cd01335
    Location:44214
    Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
    TIGR04085
    Location:296384
    rSAM_more_4Fe4S; radical SAM additional 4Fe4S-binding SPASM domain
    TIGR04546
    Location:2391
    rSAM_ahbC_deAc; 12,18-didecarboxysiroheme deacetylase
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