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DVU1468 peptidase/PDZ domain-containing protein [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2794137, updated on 20-Aug-2016

Summary

Gene symbol
DVU1468
Gene description
peptidase/PDZ domain-containing protein
Locus tag
DVU1468
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (1548081..1549529, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene acetylglutamate kinase Neighboring gene ATP-dependent protease ATP-binding subunit HslU Neighboring gene 30S ribosomal protein S1 Neighboring gene peptidyl-prolyl cis-trans isomerase C

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Cationic antimicrobial peptide (CAMP) resistance, organism-specific biosystem (from KEGG)
    Cationic antimicrobial peptide (CAMP) resistance, organism-specific biosystemCationic antimicrobial peptides (CAMPs) play an important role in host defense against microbial infection and are key components of the innate immune response. These are found among all classes of l...
  • Cationic antimicrobial peptide (CAMP) resistance, conserved biosystem (from KEGG)
    Cationic antimicrobial peptide (CAMP) resistance, conserved biosystemCationic antimicrobial peptides (CAMPs) play an important role in host defense against microbial infection and are key components of the innate immune response. These are found among all classes of l...
  • Two-component system, organism-specific biosystem (from KEGG)
    Two-component system, organism-specific biosystemTwo-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor ...
  • Two-component system, conserved biosystem (from KEGG)
    Two-component system, conserved biosystemTwo-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor ...

General protein information

Names
peptidase/PDZ domain-containing protein
YP_010687.1
  • identified by match to protein family HMM PF00089; match to protein family HMM PF00595

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    1548081..1549529 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_010687.1 peptidase/PDZ domain-containing protein [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_010687.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72C16
    Conserved Domains (3) summary
    cd00987
    Location:268357
    PDZ_serine_protease; PDZ domain of trypsin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind ...
    TIGR02037
    Location:29476
    degP_htrA_DO; periplasmic serine protease, Do/DeqQ family
    pfam13365
    Location:94232
    Trypsin_2; Trypsin-like peptidase domain
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