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DVU1020 HD domain/sensory box protein [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2793743, updated on 20-Aug-2016

Summary

Gene symbol
DVU1020
Gene description
HD domain/sensory box protein
Locus tag
DVU1020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (1121956..1124061)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene HlyD family type I secretion membrane fusion protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene SUF system FeS assembly ATPase SufC

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
HD domain/sensory box protein
YP_010241.1
  • identified by match to protein family HMM PF01966; match to protein family HMM TIGR00229

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    1121956..1124061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_010241.1 HD domain/sensory box protein [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_010241.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72DA9
    Conserved Domains (4) summary
    COG2206
    Location:463701
    HDGYP; HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant) [Signal transduction mechanisms]
    cd00130
    Location:390492
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam08448
    Location:392497
    PAS_4; PAS fold
    pfam13487
    Location:575637
    HD_5; HD domain
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