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DVU0102 cation ABC transporter periplasmic binding protein [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2793700, updated on 20-Aug-2016

Summary

Gene symbol
DVU0102
Gene description
cation ABC transporter periplasmic binding protein
Locus tag
DVU0102
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (135121..136113)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene TonB-dependent receptor Neighboring gene UbiE/COQ5 family methlytransferase Neighboring gene cation ABC transporter ATP-binding protein Neighboring gene cation ABC transporter permease

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • ABC transporters, organism-specific biosystem (from KEGG)
    ABC transporters, organism-specific biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • ABC transporters, conserved biosystem (from KEGG)
    ABC transporters, conserved biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
  • Zinc transport system, organism-specific biosystem (from KEGG)
    Zinc transport system, organism-specific biosystemStructural complex; Environmental information processing; Metallic cation, iron-siderophore and vitamin B12 transport system
  • Zinc transport system, conserved biosystem (from KEGG)
    Zinc transport system, conserved biosystemStructural complex; Environmental information processing; Metallic cation, iron-siderophore and vitamin B12 transport system

General protein information

Names
cation ABC transporter periplasmic binding protein
YP_009327.1
  • identified by match to protein family HMM PF01297

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    135121..136113
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009327.1 cation ABC transporter periplasmic binding protein [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009327.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72FW1
    Conserved Domains (1) summary
    cl00262
    Location:48237
    TroA-like; Helical backbone metal receptor (TroA-like domain). These proteins have been shown to function in the ABC transport of ferric siderophores and metal ions such as Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is formed in the interface between ...
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