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DVU0168 oligopeptide/dipeptide ABC transporter permease [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2793574, updated on 20-Aug-2016

Summary

Gene symbol
DVU0168
Gene description
oligopeptide/dipeptide ABC transporter permease
Locus tag
DVU0168
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (208285..209262, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene oligopeptide/dipeptide ABC transporter ATP-binding protein Neighboring gene oligopeptide/dipeptide ABC transporter permease Neighboring gene oligopeptide/dipeptide ABC transporter periplasmic oligopeptide/dipeptide-binding protein Neighboring gene methyl-accepting chemotaxis protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Peptides/nickel transport system, organism-specific biosystem (from KEGG)
    Peptides/nickel transport system, organism-specific biosystemStructural complex; Environmental information processing; Peptide and nickel transport system
  • Peptides/nickel transport system, conserved biosystem (from KEGG)
    Peptides/nickel transport system, conserved biosystemStructural complex; Environmental information processing; Peptide and nickel transport system
  • Quorum sensing, organism-specific biosystem (from KEGG)
    Quorum sensing, organism-specific biosystemQuorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal mol...
  • Quorum sensing, conserved biosystem (from KEGG)
    Quorum sensing, conserved biosystemQuorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal mol...

General protein information

Names
oligopeptide/dipeptide ABC transporter permease
YP_009393.1
  • identified by match to protein family HMM PF00528

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    208285..209262 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009393.1 oligopeptide/dipeptide ABC transporter permease [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009393.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72FP5
    Conserved Domains (2) summary
    COG0601
    Location:1323
    DppB; ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism]
    cl00427
    Location:1320
    TM_PBP2; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and ...
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