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DVU2084 oligopeptide-binding protein [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2793538, updated on 14-Apr-2016

Summary

Gene symbol
DVU2084
Gene description
oligopeptide-binding protein
Locus tag
DVU2084
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (2170730..2172427, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene flagellin Neighboring gene GTP pyrophosphokinase Neighboring gene Snf2 family protein Neighboring gene GntR family transcriptional regulator Neighboring gene hypothetical protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Peptides/nickel transport system, organism-specific biosystem (from KEGG)
    Peptides/nickel transport system, organism-specific biosystemStructural complex; Environmental information processing; Peptide and nickel transport system
  • Peptides/nickel transport system, conserved biosystem (from KEGG)
    Peptides/nickel transport system, conserved biosystemStructural complex; Environmental information processing; Peptide and nickel transport system
  • Quorum sensing, organism-specific biosystem (from KEGG)
    Quorum sensing, organism-specific biosystemQuorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal mol...
  • Quorum sensing, conserved biosystem (from KEGG)
    Quorum sensing, conserved biosystemQuorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal mol...

General protein information

Names
oligopeptide-binding protein
YP_011297.1
  • identified by similarity to SP:P42061; match to protein family HMM PF00496

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    2170730..2172427 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_011297.1 oligopeptide-binding protein [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_011297.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72AB3
    Conserved Domains (2) summary
    cd08514
    Location:63541
    PBP2_AppA_like; The substrate-binding component of the oligopeptide-binding protein, AppA, from Bacillus subtilis contains the type 2 periplasmic-binding fold
    COG0747
    Location:52556
    DdpA; ABC-type transport system, periplasmic component [Amino acid transport and metabolism]
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