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DVU0025 sensory box histidine kinase [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2793532, updated on 20-Aug-2016

Summary

Gene symbol
DVU0025
Gene description
sensory box histidine kinase
Locus tag
DVU0025
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (27714..29873, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene HAMP domain/GGDEF domain/EAL domain-containing protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene tRNA Neighboring gene hypothetical protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
sensory box histidine kinase
YP_009250.1
  • identified by match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF02518; match to protein family HMM TIGR00229

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    27714..29873 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009250.1 sensory box histidine kinase [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009250.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72G36
    Conserved Domains (8) summary
    cd00082
    Location:458544
    HisKA; Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via ...
    smart00086
    Location:281323
    PAC; Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
    smart00091
    Location:335397
    PAS; PAS domain
    smart00387
    Location:598709
    HATPase_c; Histidine kinase-like ATPases
    COG3852
    Location:340709
    NtrB; Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]
    cd00130
    Location:88189
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    TIGR00229
    Location:79199
    sensory_box; PAS domain S-box
    pfam08447
    Location:230317
    PAS_3; PAS fold
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