Format

Send to:

Choose Destination

rho transcription termination factor Rho [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2793462, updated on 13-Aug-2016

Summary

Gene symbol
rho
Gene description
transcription termination factor Rho
Locus tag
DVU1571
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Sequence:
NC_002937.3 (1653748..1655037, complement)

NC_002937.3Genomic Context describing neighboring genes Neighboring gene ferritin Neighboring gene pyruvate ferredoxin oxidoreductase subunit alpha Neighboring gene pyruvate ferredoxin oxidoreductase subunit beta Neighboring gene CarD family transcriptional regulator Neighboring gene peptidyl-tRNA hydrolase

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • RNA degradation, organism-specific biosystem (from KEGG)
    RNA degradation, organism-specific biosystemThe correct processing, quality control and turnover of cellular RNA molecules are critical to many aspects in the expression of genetic information. In eukaryotes, two major pathways of mRNA decay e...
  • RNA degradation, conserved biosystem (from KEGG)
    RNA degradation, conserved biosystemThe correct processing, quality control and turnover of cellular RNA molecules are critical to many aspects in the expression of genetic information. In eukaryotes, two major pathways of mRNA decay e...

General protein information

Names
transcription termination factor Rho
YP_010790.2
  • An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002937.3 Reference assembly

    Range
    1653748..1655037 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_010790.2 transcription termination factor Rho [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_010790.2

    Status: REVIEWED

    Conserved Domains (4) summary
    PRK09376
    Location:14429
    rho; transcription termination factor Rho; Provisional
    cd01128
    Location:166415
    rho_factor; Transcription termination factor rho is a bacterial ATP-dependent RNA/DNA helicase. It is a homohexamer. Each monomer consists of an N-terminal domain of the OB fold, which is responsible for binding to cysteine rich nucleotides. This alignment is of the ...
    pfam07497
    Location:66138
    Rho_RNA_bind; Rho termination factor, RNA-binding domain
    pfam07498
    Location:1860
    Rho_N; Rho termination factor, N-terminal domain
Support Center