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nifA-2 Nif-specific regulatory protein [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2781575, updated on 29-Aug-2016

Summary

Gene symbol
nifA-2
Gene description
Nif-specific regulatory protein
Locus tag
DVUA0143
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Location:
plasmid: pDV
Sequence:
NC_005863.1 (184786..186333, complement)

NC_005863.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene miscRNA

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Two-component system, organism-specific biosystem (from KEGG)
    Two-component system, organism-specific biosystemTwo-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor ...
  • Two-component system, conserved biosystem (from KEGG)
    Two-component system, conserved biosystemTwo-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor ...

General protein information

Names
Nif-specific regulatory protein
YP_009183.1
  • identified by similarity to SP:P27713; match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; match to protein family HMM TIGR01199; match to protein family HMM TIGR01817

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005863.1 Reference assembly

    Range
    184786..186333 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009183.1 Nif-specific regulatory protein (plasmid) [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009183.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72WE6
    Conserved Domains (4) summary
    smart00065
    Location:25172
    GAF; Domain present in phytochromes and cGMP-specific phosphodiesterases
    TIGR01817
    Location:7504
    nifA; Nif-specific regulatory protein
    pfam00158
    Location:197364
    Sigma54_activat; Sigma-54 interaction domain
    pfam02954
    Location:463502
    HTH_8; Bacterial regulatory protein, Fis family
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