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DVUA0100 sigma-54 dependent transcriptional regulator [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2781504, updated on 29-Aug-2016

Summary

Gene symbol
DVUA0100
Gene description
sigma-54 dependent transcriptional regulator
Locus tag
DVUA0100
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Location:
plasmid: pDV
Sequence:
NC_005863.1 (136112..137839, complement)

NC_005863.1Genomic Context describing neighboring genes Neighboring gene dehydrogenase Neighboring gene HAMP domain-containing protein Neighboring gene hrpY/hrcU family type III secretion protein Neighboring gene type III secretion inner membrane protein Neighboring gene HrpO family type III secretion protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
sigma-54 dependent transcriptional regulator
YP_009140.1
  • identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005863.1 Reference assembly

    Range
    136112..137839 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009140.1 sigma-54 dependent transcriptional regulator (plasmid) [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009140.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72WI9
    Conserved Domains (3) summary
    smart00382
    Location:187326
    AAA; ATPases associated with a variety of cellular activities
    pfam00158
    Location:167333
    Sigma54_activat; Sigma-54 interaction domain
    pfam02954
    Location:529566
    HTH_8; Bacterial regulatory protein, Fis family
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