Format

Send to:

Choose Destination

DVUA0057 sigma-54 dependent transcriptional regulator/response regulator [ Desulfovibrio vulgaris str. Hildenborough ]

Gene ID: 2781478, updated on 29-Aug-2016

Summary

Gene symbol
DVUA0057
Gene description
sigma-54 dependent transcriptional regulator/response regulator
Locus tag
DVUA0057
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Desulfovibrio vulgaris str. Hildenborough (strain: Hildenborough, old-name: Desulfovibrio vulgaris Hildenborough)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio

Genomic context

Location:
plasmid: pDV
Sequence:
NC_005863.1 (68687..70117)

NC_005863.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene glycosyl transferase, group 1 family protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene BNR/Asp-box repeat-containing protein Neighboring gene hypothetical protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Names
sigma-54 dependent transcriptional regulator/response regulator
YP_009097.1
  • identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005863.1 Reference assembly

    Range
    68687..70117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009097.1 sigma-54 dependent transcriptional regulator/response regulator (plasmid) [Desulfovibrio vulgaris str. Hildenborough]

    See identical proteins and their annotated locations for YP_009097.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q72WN2
    Conserved Domains (4) summary
    cd00156
    Location:5122
    REC; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; ...
    TIGR02915
    Location:4474
    PEP_resp_reg; PEP-CTERM-box response regulator transcription factor
    pfam00158
    Location:169335
    Sigma54_activat; Sigma-54 interaction domain
    pfam02954
    Location:434472
    HTH_8; Bacterial regulatory protein, Fis family
Support Center