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Armc7 armadillo repeat containing 7 [ Mus musculus (house mouse) ]

Gene ID: 276905, updated on 26-Sep-2022

Summary

Official Symbol
Armc7provided by MGI
Official Full Name
armadillo repeat containing 7provided by MGI
Primary source
MGI:MGI:2679719
See related
Ensembl:ENSMUSG00000057219 AllianceGenome:MGI:2679719
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
A630084C13
Summary
Orthologous to human ARMC7 (armadillo repeat containing 7). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in thymus adult (RPKM 10.1), spleen adult (RPKM 5.0) and 27 other tissues See more
Orthologs
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Genomic context

See Armc7 in Genome Data Viewer
Location:
11; 11 E2
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (115366461..115381294)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (115475635..115490468)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene tripartite motif-containing 80 Neighboring gene microRNA 3968 Neighboring gene predicted gene 11695 Neighboring gene solute carrier family 16 (monocarboxylic acid transporters), member 5 Neighboring gene ribosomal protein L39 pseudogene Neighboring gene 5',3'-nucleotidase, cytosolic Neighboring gene Jupiter microtubule associated homolog 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

General gene information

Homology

Clone Names

  • MGC27721, A630084C13rik

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 

General protein information

Preferred Names
armadillo repeat-containing protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001361594.1NP_001348523.1  armadillo repeat-containing protein 7 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL645470
  2. NM_177778.5NP_808446.1  armadillo repeat-containing protein 7 isoform 1

    See identical proteins and their annotated locations for NP_808446.1

    Status: VALIDATED

    Source sequence(s)
    AL645470
    Consensus CDS
    CCDS25636.1
    UniProtKB/Swiss-Prot
    Q3UJZ3, Q8R599
    Related
    ENSMUSP00000046120.7, ENSMUST00000035240.7
    Conserved Domains (2) summary
    cd00020
    Location:11122
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:1743
    ARM; armadillo repeat [structural motif]

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    115366461..115381294
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017314580.2XP_017170069.1  armadillo repeat-containing protein 7 isoform X3

  2. XM_006533481.1XP_006533544.1  armadillo repeat-containing protein 7 isoform X1

    Conserved Domains (2) summary
    sd00043
    Location:4379
    ARM; armadillo repeat [structural motif]
    pfam00514
    Location:3978
    Arm; Armadillo/beta-catenin-like repeat
  3. XM_006533482.3XP_006533545.1  armadillo repeat-containing protein 7 isoform X2

    See identical proteins and their annotated locations for XP_006533545.1