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SPSK_04076 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [ Sporothrix schenckii 1099-18 ]

Gene ID: 27666164, updated on 30-Nov-2023

Summary

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Gene symbol
SPSK_04076
Gene description
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B
Locus tag
SPSK_04076
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sporothrix schenckii 1099-18 (strain: 1099-18, nat-host: Homo sapiens, culture-collection: ATCC:MYA-4821)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomataceae; Sporothrix
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Genomic context

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See SPSK_04076 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_015971148.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene methyltransferase type 12 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015971148.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Asexual propagation of a virulent clone complex in a human and feline outbreak of sporotrichosis. Teixeira Mde M, et al. Eukaryot Cell, 2015 Feb. PMID 25480940, Free PMC Article
  2. Comparative genomics of the major fungal agents of human and animal Sporotrichosis: Sporothrix schenckii and Sporothrix brasiliensis. Teixeira MM, et al. BMC Genomics, 2014 Oct 29. PMID 25351875, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutaminyl-tRNAGln biosynthesis via transamidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial translation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B
XP_016586235.1
  • identified by sequence similarity

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_015971148.1 Reference assembly

    Range
    5406046..5408085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016730887.1 → XP_016586235.1  aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [Sporothrix schenckii 1099-18]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0F2M376, U7PVQ6
    Conserved Domains (3) summary
    smart00845
    Location:480 → 657
    GatB_Yqey; GatB domain
    COG0064
    Location:102 → 657
    GatB; Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit [Translation, ribosomal structure and biogenesis]
    pfam02934
    Location:104 → 424
    GatB_N; GatB/GatE catalytic domain
Nucleotide Protein
Heading Accession and Version

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