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MMP_RS00485 mRNA surveillance protein Pelota [ Methanococcus maripaludis S2 ]

Gene ID: 2761608, updated on 10-Apr-2017

Summary

Gene symbol
MMP_RS00485
Gene description
mRNA surveillance protein Pelota
Locus tag
MMP_RS00485
Gene type
protein coding
Organism
Methanococcus maripaludis S2 (strain: S2, old-name: Methanococcus maripaludis)
Lineage
Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus
Old locus tag
MMP0085

Genomic context

Sequence:
NC_005791.1 (96131..97177, complement)

NC_005791.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene pseudo Neighboring gene hydroxymethylglutaryl-CoA reductase (NADPH) Neighboring gene DNA-directed RNA polymerase sigma-70 factor Neighboring gene glutamyl-tRNA reductase

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • mRNA surveillance pathway, organism-specific biosystem (from KEGG)
    mRNA surveillance pathway, organism-specific biosystemThe mRNA surveillance pathway is a quality control mechanism that detects and degrades abnormal mRNAs. These pathways include nonsense-mediated mRNA decay (NMD), nonstop mRNA decay (NSD), and no-go ...
  • mRNA surveillance pathway, conserved biosystem (from KEGG)
    mRNA surveillance pathway, conserved biosystemThe mRNA surveillance pathway is a quality control mechanism that detects and degrades abnormal mRNAs. These pathways include nonsense-mediated mRNA decay (NMD), nonstop mRNA decay (NSD), and no-go ...

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005791.1 Reference assembly

    Range
    96131..97177 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011170029.1 Peptide Sequence

    See identical proteins and their annotated locations for WP_011170029.1

    UniProtKB/Swiss-Prot
    Q6M133
    Conserved Domains (4) summary
    COG1537
    Location:1348
    PelA; Stalled ribosome rescue protein Dom34, pelota family [Translation, ribosomal structure and biogenesis]
    pfam03463
    Location:1125
    eRF1_1; eRF1 domain 1
    pfam03464
    Location:133240
    eRF1_2; eRF1 domain 2
    pfam03465
    Location:253347
    eRF1_3; eRF1 domain 3
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