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Npas3 neuronal PAS domain protein 3 [ Mus musculus (house mouse) ]

Gene ID: 27386, updated on 18-Sep-2024

Summary

Official Symbol
Npas3provided by MGI
Official Full Name
neuronal PAS domain protein 3provided by MGI
Primary source
MGI:MGI:1351610
See related
Ensembl:ENSMUSG00000021010 AllianceGenome:MGI:1351610
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
bHLHe12; 4930423H22Rik
Summary
Enables protein heterodimerization activity. Involved in positive regulation of transcription, DNA-templated. Acts upstream of or within locomotory behavior; maternal behavior; and startle response. Located in nucleus. Is expressed in several structures, including central nervous system; heart and pericardium; salivary gland; sensory organ; and urinary system. Orthologous to human NPAS3 (neuronal PAS domain protein 3). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in whole brain E14.5 (RPKM 5.4), CNS E14 (RPKM 4.1) and 9 other tissues See more
Orthologs
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Genomic context

See Npas3 in Genome Data Viewer
Location:
12 C1; 12 22.31 cM
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (53294874..54118956)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (53248026..54072173)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene A kinase anchor protein 6 Neighboring gene STARR-seq mESC enhancer starr_32141 Neighboring gene predicted gene, 53720 Neighboring gene predicted gene, 18898 Neighboring gene RIKEN cDNA 1700030L22 gene Neighboring gene STARR-seq mESC enhancer starr_32144 Neighboring gene STARR-seq mESC enhancer starr_32145 Neighboring gene predicted gene, 51419 Neighboring gene STARR-seq mESC enhancer starr_32146 Neighboring gene STARR-seq mESC enhancer starr_32148 Neighboring gene STARR-seq mESC enhancer starr_32149 Neighboring gene STARR-seq mESC enhancer starr_32150 Neighboring gene STARR-seq mESC enhancer starr_32151 Neighboring gene VISTA enhancer mm1188 Neighboring gene STARR-seq mESC enhancer starr_32152 Neighboring gene STARR-seq mESC enhancer starr_32153 Neighboring gene STARR-seq mESC enhancer starr_32154 Neighboring gene STARR-seq mESC enhancer starr_32155 Neighboring gene STARR-seq mESC enhancer starr_32156 Neighboring gene STARR-seq mESC enhancer starr_32157 Neighboring gene predicted gene, 35818 Neighboring gene predicted gene, 40424

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (4)  1 citation

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein heterodimerization activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
neuronal PAS domain-containing protein 3
Names
basic-helix-loop-helix-PAS protein MOP6
member of PAS protein 6
neuronal PAS3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001370960.1NP_001357889.1  neuronal PAS domain-containing protein 3 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC139934, BC120885, CT030137
    UniProtKB/TrEMBL
    A0A1Y7VJG5, Q0IJ77
    Related
    ENSMUSP00000152411.3, ENSMUST00000223358.3
    Conserved Domains (4) summary
    smart00091
    Location:158216
    PAS; PAS domain
    pfam08447
    Location:349436
    PAS_3; PAS fold
    NF012181
    Location:475598
    MSCRAMM_SdrD; MSCRAMM family adhesin SdrD
    cd19732
    Location:53130
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
  2. NM_001370961.1NP_001357890.1  neuronal PAS domain-containing protein 3 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC120181, AC125451, AC139934, AC159634, CR974571, CT030137
    UniProtKB/TrEMBL
    F8VQB2
    Conserved Domains (4) summary
    smart00091
    Location:188246
    PAS; PAS domain
    pfam08447
    Location:379466
    PAS_3; PAS fold
    NF000535
    Location:466631
    MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
    cd19732
    Location:84160
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
  3. NM_001370962.1NP_001357891.1  neuronal PAS domain-containing protein 3 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC120181, AC125451, AC139934, AC159634, CR974571, CT030137
    UniProtKB/TrEMBL
    F8VQB2
    Conserved Domains (4) summary
    smart00091
    Location:186244
    PAS; PAS domain
    pfam08447
    Location:377464
    PAS_3; PAS fold
    NF012181
    Location:503626
    MSCRAMM_SdrD; MSCRAMM family adhesin SdrD
    cd19732
    Location:84160
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
  4. NM_001370963.1NP_001357892.1  neuronal PAS domain-containing protein 3 isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC120181, AC125451, AC139934, CR974571, CT030137
    UniProtKB/TrEMBL
    Q0IJ77
    Conserved Domains (4) summary
    smart00091
    Location:156214
    PAS; PAS domain
    pfam08447
    Location:347434
    PAS_3; PAS fold
    NF000535
    Location:434599
    MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
    cd19732
    Location:53130
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
  5. NM_001370964.1NP_001357893.1  neuronal PAS domain-containing protein 3 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC120181, AC125451, AC139934, AC159634, CR974571, CT030137
    UniProtKB/TrEMBL
    F8VQB2
    Conserved Domains (4) summary
    smart00091
    Location:203261
    PAS; PAS domain
    pfam08447
    Location:394481
    PAS_3; PAS fold
    NF000535
    Location:481644
    MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
    cd19732
    Location:84160
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
  6. NM_013780.3NP_038808.3  neuronal PAS domain-containing protein 3 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC139934, AF173871, CT030137
    Consensus CDS
    CCDS25907.1
    UniProtKB/TrEMBL
    F8VQB2
    Related
    ENSMUSP00000098975.3, ENSMUST00000101432.3
    Conserved Domains (4) summary
    smart00091
    Location:186244
    PAS; PAS domain
    pfam08447
    Location:377464
    PAS_3; PAS fold
    NF000535
    Location:464629
    MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
    cd19732
    Location:84160
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    53294874..54118956
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006515941.4XP_006516004.1  neuronal PAS domain-containing protein 3 isoform X21

    UniProtKB/TrEMBL
    F8VQB2
    Conserved Domains (3) summary
    smart00091
    Location:205263
    PAS; PAS domain
    pfam08447
    Location:396483
    PAS_3; PAS fold
    cd19732
    Location:84160
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
  2. XM_030246748.2XP_030102608.1  neuronal PAS domain-containing protein 3 isoform X22

    UniProtKB/TrEMBL
    F8VQB2
    Conserved Domains (3) summary
    smart00091
    Location:203261
    PAS; PAS domain
    pfam08447
    Location:394481
    PAS_3; PAS fold
    cd19732
    Location:84160
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
  3. XM_006515942.4XP_006516005.1  neuronal PAS domain-containing protein 3 isoform X27

    UniProtKB/TrEMBL
    Q0IJ77
    Related
    ENSMUSP00000152452.2, ENSMUST00000223057.2
    Conserved Domains (3) summary
    smart00091
    Location:175233
    PAS; PAS domain
    pfam08447
    Location:366453
    PAS_3; PAS fold
    cd19732
    Location:53130
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
  4. XM_036157451.1XP_036013344.1  neuronal PAS domain-containing protein 3 isoform X28

    UniProtKB/TrEMBL
    Q0IJ77
    Conserved Domains (4) summary
    smart00091
    Location:173231
    PAS; PAS domain
    pfam08447
    Location:364451
    PAS_3; PAS fold
    cd19732
    Location:53130
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033609
    Location:457617
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
  5. XM_036157450.1XP_036013343.1  neuronal PAS domain-containing protein 3 isoform X23

    UniProtKB/TrEMBL
    F8VQB2
    Conserved Domains (4) summary
    smart00091
    Location:203261
    PAS; PAS domain
    pfam08447
    Location:394481
    PAS_3; PAS fold
    cd19732
    Location:84160
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:521643
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  6. XM_030246749.2XP_030102609.1  neuronal PAS domain-containing protein 3 isoform X24

    UniProtKB/TrEMBL
    F8VQB2
    Conserved Domains (3) summary
    smart00091
    Location:188246
    PAS; PAS domain
    pfam08447
    Location:379466
    PAS_3; PAS fold
    cd19732
    Location:84160
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
  7. XM_030246750.2XP_030102610.1  neuronal PAS domain-containing protein 3 isoform X25

    UniProtKB/TrEMBL
    F8VQB2
    Conserved Domains (3) summary
    smart00091
    Location:186244
    PAS; PAS domain
    pfam08447
    Location:377464
    PAS_3; PAS fold
    cd19732
    Location:84160
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
  8. XM_030246751.2XP_030102611.1  neuronal PAS domain-containing protein 3 isoform X26

    UniProtKB/TrEMBL
    F8VQB2
    Conserved Domains (4) summary
    smart00091
    Location:188246
    PAS; PAS domain
    pfam08447
    Location:379466
    PAS_3; PAS fold
    NF012181
    Location:505628
    MSCRAMM_SdrD; MSCRAMM family adhesin SdrD
    cd19732
    Location:84160
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
  9. XM_036157452.1XP_036013345.1  neuronal PAS domain-containing protein 3 isoform X29

    UniProtKB/TrEMBL
    Q0IJ77
    Conserved Domains (4) summary
    smart00091
    Location:158216
    PAS; PAS domain
    pfam08447
    Location:349436
    PAS_3; PAS fold
    cd19732
    Location:53130
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033609
    Location:442602
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
  10. XM_036157455.1XP_036013348.1  neuronal PAS domain-containing protein 3 isoform X32

    UniProtKB/TrEMBL
    Q0IJ77
    Conserved Domains (4) summary
    smart00091
    Location:158216
    PAS; PAS domain
    pfam08447
    Location:349436
    PAS_3; PAS fold
    cd19732
    Location:53130
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:476599
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  11. XM_036157454.1XP_036013347.1  neuronal PAS domain-containing protein 3 isoform X31

    UniProtKB/TrEMBL
    Q0IJ77
    Conserved Domains (4) summary
    smart00091
    Location:156214
    PAS; PAS domain
    pfam08447
    Location:347434
    PAS_3; PAS fold
    cd19732
    Location:53130
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033609
    Location:440600
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
  12. XM_036157453.1XP_036013346.1  neuronal PAS domain-containing protein 3 isoform X30

    UniProtKB/TrEMBL
    Q0IJ77
    Conserved Domains (4) summary
    smart00091
    Location:158216
    PAS; PAS domain
    pfam08447
    Location:349436
    PAS_3; PAS fold
    cd19732
    Location:53130
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:476601
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  13. XM_036157456.1XP_036013349.1  neuronal PAS domain-containing protein 3 isoform X33

    UniProtKB/TrEMBL
    Q0IJ77
    Conserved Domains (4) summary
    smart00091
    Location:156214
    PAS; PAS domain
    pfam08447
    Location:347434
    PAS_3; PAS fold
    cd19732
    Location:53130
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:474596
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  14. XM_030246754.2XP_030102614.1  neuronal PAS domain-containing protein 3 isoform X35

    UniProtKB/TrEMBL
    Q0IJ77
    Conserved Domains (4) summary
    smart00091
    Location:65123
    PAS; PAS domain
    pfam08447
    Location:256343
    PAS_3; PAS fold
    NF000535
    Location:377500
    MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
    cl00081
    Location:122
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
  15. XM_036157459.1XP_036013352.1  neuronal PAS domain-containing protein 3 isoform X36

    UniProtKB/TrEMBL
    Q0IJ77
    Conserved Domains (4) summary
    smart00091
    Location:50108
    PAS; PAS domain
    pfam08447
    Location:241328
    PAS_3; PAS fold
    NF033609
    Location:334494
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
    cl00081
    Location:122
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
  16. XM_036157460.1XP_036013353.1  neuronal PAS domain-containing protein 3 isoform X38

    UniProtKB/TrEMBL
    Q0IJ77
    Conserved Domains (4) summary
    smart00091
    Location:48106
    PAS; PAS domain
    pfam08447
    Location:239326
    PAS_3; PAS fold
    NF033609
    Location:332492
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
    cl00081
    Location:122
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
  17. XM_036157458.1XP_036013351.1  neuronal PAS domain-containing protein 3 isoform X36

    UniProtKB/TrEMBL
    Q0IJ77
    Conserved Domains (4) summary
    smart00091
    Location:50108
    PAS; PAS domain
    pfam08447
    Location:241328
    PAS_3; PAS fold
    NF033609
    Location:334494
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
    cl00081
    Location:122
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
  18. XM_036157457.1XP_036013350.1  neuronal PAS domain-containing protein 3 isoform X34

    UniProtKB/TrEMBL
    A0A1Y7VM06
    Conserved Domains (4) summary
    smart00091
    Location:67125
    PAS; PAS domain
    pfam08447
    Location:258345
    PAS_3; PAS fold
    NF033609
    Location:351511
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
    cl00081
    Location:122
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
  19. XM_036157462.1XP_036013355.1  neuronal PAS domain-containing protein 3 isoform X40

    Conserved Domains (2) summary
    smart00091
    Location:461499
    PAS; PAS domain
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
  20. XM_036157463.1XP_036013356.1  neuronal PAS domain-containing protein 3 isoform X41

    Conserved Domains (2) summary
    smart00091
    Location:459497
    PAS; PAS domain
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
  21. XM_036157464.1XP_036013357.1  neuronal PAS domain-containing protein 3 isoform X42

    Conserved Domains (1) summary
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
  22. XM_036157437.1XP_036013330.1  neuronal PAS domain-containing protein 3 isoform X1

    Conserved Domains (4) summary
    smart00091
    Location:478536
    PAS; PAS domain
    pfam08447
    Location:669756
    PAS_3; PAS fold
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033609
    Location:762922
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
  23. XM_036157440.1XP_036013333.1  neuronal PAS domain-containing protein 3 isoform X5

    Conserved Domains (4) summary
    smart00091
    Location:478536
    PAS; PAS domain
    pfam08447
    Location:669756
    PAS_3; PAS fold
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:796919
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  24. XM_036157438.1XP_036013331.1  neuronal PAS domain-containing protein 3 isoform X3

    Conserved Domains (4) summary
    smart00091
    Location:476534
    PAS; PAS domain
    pfam08447
    Location:667754
    PAS_3; PAS fold
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033609
    Location:760920
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
  25. XM_006515938.4XP_006516001.2  neuronal PAS domain-containing protein 3 isoform X2

    Conserved Domains (4) summary
    smart00091
    Location:478536
    PAS; PAS domain
    pfam08447
    Location:669756
    PAS_3; PAS fold
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:796921
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  26. XM_030246744.2XP_030102604.2  neuronal PAS domain-containing protein 3 isoform X6

    Conserved Domains (4) summary
    smart00091
    Location:478536
    PAS; PAS domain
    pfam08447
    Location:669756
    PAS_3; PAS fold
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:796918
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  27. XM_036157439.1XP_036013332.1  neuronal PAS domain-containing protein 3 isoform X4

    Conserved Domains (4) summary
    smart00091
    Location:476534
    PAS; PAS domain
    pfam08447
    Location:667754
    PAS_3; PAS fold
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:794919
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  28. XM_036157441.1XP_036013334.1  neuronal PAS domain-containing protein 3 isoform X7

    Conserved Domains (4) summary
    smart00091
    Location:476534
    PAS; PAS domain
    pfam08447
    Location:667754
    PAS_3; PAS fold
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:794916
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  29. XM_036157442.1XP_036013335.1  neuronal PAS domain-containing protein 3 isoform X8

    Conserved Domains (4) summary
    smart00091
    Location:461519
    PAS; PAS domain
    pfam08447
    Location:652739
    PAS_3; PAS fold
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033609
    Location:745905
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
  30. XM_006515939.4XP_006516002.2  neuronal PAS domain-containing protein 3 isoform X9

    Conserved Domains (4) summary
    smart00091
    Location:461519
    PAS; PAS domain
    pfam08447
    Location:652739
    PAS_3; PAS fold
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:779904
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  31. XM_036157443.1XP_036013336.1  neuronal PAS domain-containing protein 3 isoform X12

    Conserved Domains (4) summary
    smart00091
    Location:461519
    PAS; PAS domain
    pfam08447
    Location:652739
    PAS_3; PAS fold
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:779902
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  32. XM_030246746.2XP_030102606.2  neuronal PAS domain-containing protein 3 isoform X13

    Conserved Domains (4) summary
    smart00091
    Location:461519
    PAS; PAS domain
    pfam08447
    Location:652739
    PAS_3; PAS fold
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:779901
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  33. XM_030246745.2XP_030102605.2  neuronal PAS domain-containing protein 3 isoform X10

    Conserved Domains (4) summary
    smart00091
    Location:459517
    PAS; PAS domain
    pfam08447
    Location:650737
    PAS_3; PAS fold
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033609
    Location:743903
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
  34. XM_006515940.4XP_006516003.2  neuronal PAS domain-containing protein 3 isoform X11

    Conserved Domains (4) summary
    smart00091
    Location:459517
    PAS; PAS domain
    pfam08447
    Location:650737
    PAS_3; PAS fold
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:777902
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  35. XM_030246747.2XP_030102607.2  neuronal PAS domain-containing protein 3 isoform X14

    Conserved Domains (4) summary
    smart00091
    Location:459517
    PAS; PAS domain
    pfam08447
    Location:650737
    PAS_3; PAS fold
    cd19732
    Location:357433
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:777899
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  36. XM_036157444.1XP_036013337.1  neuronal PAS domain-containing protein 3 isoform X15

    Conserved Domains (4) summary
    smart00091
    Location:448506
    PAS; PAS domain
    pfam08447
    Location:639726
    PAS_3; PAS fold
    cd19732
    Location:326403
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033609
    Location:732892
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
  37. XM_036157445.1XP_036013338.1  neuronal PAS domain-containing protein 3 isoform X16

    Conserved Domains (4) summary
    smart00091
    Location:446504
    PAS; PAS domain
    pfam08447
    Location:637724
    PAS_3; PAS fold
    cd19732
    Location:326403
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033609
    Location:730890
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
  38. XM_036157446.1XP_036013339.1  neuronal PAS domain-containing protein 3 isoform X17

    Conserved Domains (4) summary
    smart00091
    Location:446504
    PAS; PAS domain
    pfam08447
    Location:637724
    PAS_3; PAS fold
    cd19732
    Location:326403
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:764886
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  39. XM_036157447.1XP_036013340.1  neuronal PAS domain-containing protein 3 isoform X18

    Conserved Domains (4) summary
    smart00091
    Location:431489
    PAS; PAS domain
    pfam08447
    Location:622709
    PAS_3; PAS fold
    cd19732
    Location:326403
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033609
    Location:715875
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
  40. XM_036157448.1XP_036013341.1  neuronal PAS domain-containing protein 3 isoform X19

    Conserved Domains (4) summary
    smart00091
    Location:431489
    PAS; PAS domain
    pfam08447
    Location:622709
    PAS_3; PAS fold
    cd19732
    Location:326403
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033845
    Location:749874
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
  41. XM_036157449.1XP_036013342.1  neuronal PAS domain-containing protein 3 isoform X20

    Conserved Domains (4) summary
    smart00091
    Location:429487
    PAS; PAS domain
    pfam08447
    Location:620707
    PAS_3; PAS fold
    cd19732
    Location:326403
    bHLH-PAS_NPAS3_PASD6; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in neuronal PAS domain-containing protein 3 (NPAS3) and similar proteins
    NF033609
    Location:713873
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
  42. XM_030246752.2XP_030102612.1  neuronal PAS domain-containing protein 3 isoform X34

    UniProtKB/TrEMBL
    A0A1Y7VM06
    Conserved Domains (4) summary
    smart00091
    Location:67125
    PAS; PAS domain
    pfam08447
    Location:258345
    PAS_3; PAS fold
    NF033609
    Location:351511
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
    cl00081
    Location:122
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
  43. XM_030246756.2XP_030102616.1  neuronal PAS domain-containing protein 3 isoform X37

    UniProtKB/TrEMBL
    A0A1Y7VM06
    Conserved Domains (4) summary
    smart00091
    Location:50108
    PAS; PAS domain
    pfam08447
    Location:241328
    PAS_3; PAS fold
    NF000535
    Location:328493
    MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
    cl00081
    Location:122
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
  44. XM_036157461.1XP_036013354.1  neuronal PAS domain-containing protein 3 isoform X39

    UniProtKB/TrEMBL
    A0A1Y7VM06
    Conserved Domains (4) summary
    smart00091
    Location:48106
    PAS; PAS domain
    pfam08447
    Location:239326
    PAS_3; PAS fold
    NF033845
    Location:366491
    MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
    cl00081
    Location:122
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily