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ZNF544 zinc finger protein 544 [ Homo sapiens (human) ]

Gene ID: 27300, updated on 23-Nov-2021

Summary

Official Symbol
ZNF544provided by HGNC
Official Full Name
zinc finger protein 544provided by HGNC
Primary source
HGNC:HGNC:16759
See related
Ensembl:ENSG00000198131 Ensembl:ENSG00000283515
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in thyroid (RPKM 3.1), testis (RPKM 3.0) and 25 other tissues See more
Orthologs
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Genomic context

See ZNF544 in Genome Data Viewer
Location:
19q13.43
Exon count:
17
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (58228594..58277497)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (58740280..58788821)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372479 Neighboring gene ribosomal protein S15a pseudogene 36 Neighboring gene zinc finger protein 436 pseudogene Neighboring gene ZNF8 divergent transcript Neighboring gene ZNF8-ERVK3-1 readthrough Neighboring gene zinc finger protein 8 Neighboring gene endogenous retrovirus group K3 member 1 Neighboring gene uncharacterized LOC105372480

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

Associated conditions

Description Tests
Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
GeneReviews: Not available

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001320767.2NP_001307696.1  zinc finger protein 544 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1-3 and 21-13 all encode the same isoform (1).
    Source sequence(s)
    AC020915, AL833618, BC067271, DA193549, DA342047
    Consensus CDS
    CCDS12973.1
    UniProtKB/Swiss-Prot
    Q6NX49
    Conserved Domains (4) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
    COG5048
    Location:406699
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:494514
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:370391
    zf-H2C2_2; Zinc-finger double domain
  2. NM_001320769.2NP_001307698.1  zinc finger protein 544 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1-3 and 21-13 all encode the same isoform (1).
    Source sequence(s)
    AC020915, BC018980, DC310430
    Consensus CDS
    CCDS12973.1
    UniProtKB/Swiss-Prot
    Q6NX49
    Conserved Domains (4) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
    COG5048
    Location:406699
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:494514
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:370391
    zf-H2C2_2; Zinc-finger double domain
  3. NM_001320770.2NP_001307699.1  zinc finger protein 544 isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) differs in the 5' UTR and lacks an alternate in-frame exon in the coding region, compared to variant 1. It encodes isoform 2, which is shorter than isoform 1. Variants 4-6 all encode the same isoform (2).
    Source sequence(s)
    AK316446, AL833618, BC067271, DA193549
    Consensus CDS
    CCDS82413.1
    UniProtKB/Swiss-Prot
    Q6NX49
    UniProtKB/TrEMBL
    B7ZAY1, J3KQC8
    Related
    ENSP00000472721.1, ENST00000600044.5
    Conserved Domains (5) summary
    smart00349
    Location:1461
    KRAB; krueppel associated box
    COG5048
    Location:378671
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:466486
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:1453
    KRAB; KRAB box
    pfam13465
    Location:450475
    zf-H2C2_2; Zinc-finger double domain
  4. NM_001320771.2NP_001307700.1  zinc finger protein 544 isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) lacks an alternate in-frame exon in the coding region, compared to variant 1. It encodes isoform 2, which is shorter than isoform 1. Variants 4-6 all encode the same isoform (2).
    Source sequence(s)
    AK296846, AL833618, BC067271, DA193549
    Consensus CDS
    CCDS82413.1
    UniProtKB/Swiss-Prot
    Q6NX49
    UniProtKB/TrEMBL
    B4DL50, J3KQC8
    Related
    ENSP00000471684.1, ENST00000600220.5
    Conserved Domains (5) summary
    smart00349
    Location:1461
    KRAB; krueppel associated box
    COG5048
    Location:378671
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:466486
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:1453
    KRAB; KRAB box
    pfam13465
    Location:450475
    zf-H2C2_2; Zinc-finger double domain
  5. NM_001320773.2NP_001307702.1  zinc finger protein 544 isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6) differs in the 5' UTR and lacks an alternate in-frame exon in the coding region, compared to variant 1. It encodes isoform 2, which is shorter than isoform 1. Variants 4-6 all encode the same isoform (2).
    Source sequence(s)
    AC020915, AK296846, AL833618, BC018980, BC067271, DC310430
    Consensus CDS
    CCDS82413.1
    UniProtKB/Swiss-Prot
    Q6NX49
    UniProtKB/TrEMBL
    B4DL50, J3KQC8
    Conserved Domains (5) summary
    smart00349
    Location:1461
    KRAB; krueppel associated box
    COG5048
    Location:378671
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:466486
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:1453
    KRAB; KRAB box
    pfam13465
    Location:450475
    zf-H2C2_2; Zinc-finger double domain
  6. NM_001320774.2NP_001307703.1  zinc finger protein 544 isoform 3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (7) differs in the 5' UTR and uses an alternate in-frame splice site in the 3' terminal exon, compared to variant 1. It encodes isoform 3, which is shorter than isoform 1. Variants 7 and 24 both encode the same isoform (3).
    Source sequence(s)
    AC020915, BC018980, DC310430
    Conserved Domains (4) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
    COG5048
    Location:171464
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:259279
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:135156
    zf-H2C2_2; Zinc-finger double domain
  7. NM_001320776.2NP_001307705.1  zinc finger protein 544 isoform 4

    Status: VALIDATED

    Description
    Transcript Variant: This variant (8) has multiple differences compared to variant 1. These differences result in distinct 5' and 3' UTRs and cause translation initiation at an alternate start site, compared to variant 1. The encoded protein (isoform 4) is shorter and has distinct N- and C-termini, compared to isoform 1.
    Source sequence(s)
    AC020915, AK291656, BU626073, DA193549
    UniProtKB/Swiss-Prot
    Q6NX49
    Conserved Domains (3) summary
    smart00349
    Location:68107
    KRAB; krueppel associated box
    pfam01352
    Location:68107
    KRAB; KRAB box
    pfam13900
    Location:130151
    GVQW; Putative domain of unknown function
  8. NM_001320777.2NP_001307706.1  zinc finger protein 544 isoform 5

    Status: VALIDATED

    Description
    Transcript Variant: This variant (9) has multiple differences compared to variant 1. These differences result in distinct 5' and 3' UTRs and cause translation initiation at an alternate start site, compared to variant 1. The encoded protein (isoform 5) is shorter and has distinct N- and C-termini, compared to isoform 1.
    Source sequence(s)
    AC020915, AL833618, BC067271, DA193549, DB200767
    UniProtKB/Swiss-Prot
    Q6NX49
    Conserved Domains (2) summary
    smart00349
    Location:68107
    KRAB; krueppel associated box
    pfam01352
    Location:68107
    KRAB; KRAB box
  9. NM_001320780.2NP_001307709.1  zinc finger protein 544 isoform 6

    Status: VALIDATED

    Description
    Transcript Variant: This variant (10) contains an alternate 3' terminal exon, compared to variant 1. It encodes a shorter isoform (6) which has a distinct C-terminus, compared to isoform 1. Variants 10, 25, and 26 all encode the same isoform (6).
    Source sequence(s)
    AC020915, AK291656, BU626073, DA193549
    UniProtKB/Swiss-Prot
    Q6NX49
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  10. NM_001320781.2NP_001307710.1  zinc finger protein 544 isoform 7

    Status: VALIDATED

    Description
    Transcript Variant: This variant (11) has multiple differences compared to variant 1. These differences result in distinct 5' and 3' UTRs and cause translation initiation at an alternate start site, compared to variant 1. The encoded protein (isoform 7) is shorter and has distinct N- and C-termini, compared to isoform 1. Variants 11 and 27 both encode the same isoform (7).
    Source sequence(s)
    AC020915, BC018980, DC310430
    Conserved Domains (1) summary
    smart00349
    Location:68107
    KRAB; krueppel associated box
  11. NM_001320782.3NP_001307711.1  zinc finger protein 544 isoform 8

    Status: VALIDATED

    Description
    Transcript Variant: This variant (12) contains an alternate 3' terminal exon, compared to variant 1. It encodes a shorter isoform (8) which has a distinct C-terminus, compared to isoform 1. Variants 12, 29, 30, and 33 all encode the same isoform (8).
    Source sequence(s)
    AC020915
    Consensus CDS
    CCDS82411.1
    UniProtKB/TrEMBL
    M0QZM7
    Related
    ENSP00000470645.1, ENST00000596929.5
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  12. NM_001320783.2NP_001307712.1  zinc finger protein 544 isoform 9

    Status: VALIDATED

    Description
    Transcript Variant: This variant (13) has multiple differences compared to variant 1. These differences result in distinct 5' and 3' UTRs and cause translation initiation at an alternate start site, compared to variant 1. The encoded protein (isoform 9) is shorter and has distinct N- and C-termini, compared to isoform 1. Variants 13 and 28 both encode the same isoform (9).
    Source sequence(s)
    AC020915, AK291656, BU626073
    UniProtKB/Swiss-Prot
    Q6NX49
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  13. NM_001320785.2NP_001307714.1  zinc finger protein 544 isoform 10

    Status: VALIDATED

    Description
    Transcript Variant: This variant (14) uses alternate splice sites in the penultimate and 3' terminal exons, compared to variant 1. It encodes isoform 10 which is shorter and has a distinct C-terminus, compared to isoform 1. Variants 14-16 and 35 all encode the same isoform (10).
    Source sequence(s)
    AL833618, BC067271, DA193549, DB200767
    UniProtKB/Swiss-Prot
    Q6NX49
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  14. NM_001320786.2NP_001307715.1  zinc finger protein 544 isoform 10

    Status: VALIDATED

    Description
    Transcript Variant: This variant (15) differs in the 5' UTR and uses alternate splice sites in the penultimate and 3' terminal exons, compared to variant 1. It encodes isoform 10 which is shorter and has a distinct C-terminus, compared to isoform 1. Variants 14-16 and 35 all encode the same isoform (10).
    Source sequence(s)
    AC020915, AL833618, BC067271, DA193549, DB200767
    UniProtKB/Swiss-Prot
    Q6NX49
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  15. NM_001320787.2NP_001307716.1  zinc finger protein 544 isoform 10

    Status: VALIDATED

    Description
    Transcript Variant: This variant (16) differs in the 5' UTR and uses alternate splice sites in the penultimate and 3' terminal exons, compared to variant 1. It encodes isoform 10 which is shorter and has a distinct C-terminus, compared to isoform 1. Variants 14-16 and 35 all encode the same isoform (10).
    Source sequence(s)
    AC020915, BC018980, DC310430
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  16. NM_001320788.2NP_001307717.1  zinc finger protein 544 isoform 11

    Status: VALIDATED

    Description
    Transcript Variant: This variant (17) uses an alternate splice site in the penultimate exon, compared to variant 1. It encodes isoform 11 which is shorter and has a distinct C-terminus, compared to isoform 1. Variants 17-20, 36, and 37 all encode the same isoform (11).
    Source sequence(s)
    AC020915, AL833618, DA193549
    Consensus CDS
    CCDS82412.1
    UniProtKB/TrEMBL
    M0R2F0
    Related
    ENSP00000471480.1, ENST00000599227.5
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  17. NM_001320789.2NP_001307718.1  zinc finger protein 544 isoform 11

    Status: VALIDATED

    Description
    Transcript Variant: This variant (18) differs in the 5' UTR and uses an alternate splice site in the penultimate exon, compared to variant 1. It encodes isoform 11 which is shorter and has a distinct C-terminus, compared to isoform 1. Variants 17-20, 36, and 37 all encode the same isoform (11).
    Source sequence(s)
    AC020915, BC018980, DC310430
    Consensus CDS
    CCDS82412.1
    UniProtKB/TrEMBL
    M0R2F0
    Related
    ENSP00000472512.1, ENST00000596825.5
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  18. NM_001320791.2NP_001307720.1  zinc finger protein 544 isoform 11

    Status: VALIDATED

    Description
    Transcript Variant: This variant (19) differs in the 5' UTR and uses an alternate splice site in the penultimate exon, compared to variant 1. It encodes isoform 11 which is shorter and has a distinct C-terminus, compared to isoform 1. Variants 17-20, 36, and 37 all encode the same isoform (11).
    Source sequence(s)
    AL833618, BC067271, DA193549, DA342047
    Consensus CDS
    CCDS82412.1
    UniProtKB/Swiss-Prot
    Q6NX49
    UniProtKB/TrEMBL
    M0R2F0
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  19. NM_001320792.2NP_001307721.1  zinc finger protein 544 isoform 11

    Status: VALIDATED

    Description
    Transcript Variant: This variant (20) differs in the 5' UTR and uses an alternate splice site in the penultimate exon, compared to variant 1. It encodes isoform 11 which is shorter and has a distinct C-terminus, compared to isoform 1. Variants 17-20, 36, and 37 all encode the same isoform (11).
    Source sequence(s)
    AC020915, AL833618, DA193549
    Consensus CDS
    CCDS82412.1
    UniProtKB/TrEMBL
    M0R2F0
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  20. NM_001387390.1NP_001374319.1  zinc finger protein 544 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (21), as well as variants 1-3, 22, and 23, encodes isoform 1.
    Source sequence(s)
    AC020915
    Related
    ENSP00000269829.4, ENST00000269829.5
    Conserved Domains (4) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
    COG5048
    Location:406699
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:494514
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:370391
    zf-H2C2_2; Zinc-finger double domain
  21. NM_001387391.1NP_001374320.1  zinc finger protein 544 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (22), as well as variants 1-3, 21, and 23, encodes isoform 1.
    Source sequence(s)
    AC020915
    Conserved Domains (4) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
    COG5048
    Location:406699
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:494514
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:370391
    zf-H2C2_2; Zinc-finger double domain
  22. NM_001387392.1NP_001374321.1  zinc finger protein 544 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (23), as well as variants 1-3, 21, and 22, encodes isoform 1.
    Source sequence(s)
    AC020915
    Conserved Domains (4) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
    COG5048
    Location:406699
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:494514
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:370391
    zf-H2C2_2; Zinc-finger double domain
  23. NM_001387393.1NP_001374322.1  zinc finger protein 544 isoform 3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (24), as well as variant 7, encodes isoform 3.
    Source sequence(s)
    AC020915
    Conserved Domains (4) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
    COG5048
    Location:171464
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:259279
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:135156
    zf-H2C2_2; Zinc-finger double domain
  24. NM_001387394.1NP_001374323.1  zinc finger protein 544 isoform 6

    Status: VALIDATED

    Description
    Transcript Variant: This variant (25), as well as variants 10 and 26, encodes isoform 6.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  25. NM_001387395.1NP_001374324.1  zinc finger protein 544 isoform 6

    Status: VALIDATED

    Description
    Transcript Variant: This variant (26), as well as variants 10 and 25, encodes isoform 6.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  26. NM_001387396.1NP_001374325.1  zinc finger protein 544 isoform 7

    Status: VALIDATED

    Description
    Transcript Variant: This variant (27), as well as variant 11, encodes isoform 7.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:68107
    KRAB; krueppel associated box
  27. NM_001387397.1NP_001374326.1  zinc finger protein 544 isoform 9

    Status: VALIDATED

    Description
    Transcript Variant: This variant (28), as well as variant 13, encodes isoform 9.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  28. NM_001387398.1NP_001374327.1  zinc finger protein 544 isoform 8

    Status: VALIDATED

    Description
    Transcript Variant: This variant (29), as well as variants 12, 30, and 33, encodes isoform 8.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  29. NM_001387399.1NP_001374328.1  zinc finger protein 544 isoform 8

    Status: VALIDATED

    Description
    Transcript Variant: This variant (30), as well as variants 12, 29, and 33, encodes isoform 8.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  30. NM_001387400.1NP_001374329.1  zinc finger protein 544 isoform 8

    Status: VALIDATED

    Description
    Transcript Variant: This variant (33), as well as variants 12, 29, and 30, encodes isoform 8.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  31. NM_001387401.1NP_001374330.1  zinc finger protein 544 isoform 26

    Status: VALIDATED

    Description
    Transcript Variant: This variant (31), as well as variants 32 and 34, encodes isoform 26.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  32. NM_001387402.1NP_001374331.1  zinc finger protein 544 isoform 26

    Status: VALIDATED

    Description
    Transcript Variant: This variant (32), as well as variants 31 and 34, encodes isoform 26.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  33. NM_001387403.1NP_001374332.1  zinc finger protein 544 isoform 26

    Status: VALIDATED

    Description
    Transcript Variant: This variant (34), as well as variants 31 and 32, encodes isoform 26.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  34. NM_001387407.1NP_001374336.1  zinc finger protein 544 isoform 10

    Status: VALIDATED

    Description
    Transcript Variant: This variant (35), as well as variants 14-16, encodes isoform 10.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  35. NM_001387408.1NP_001374337.1  zinc finger protein 544 isoform 11

    Status: VALIDATED

    Description
    Transcript Variant: This variant (36), as well as variants 17-20 and 37, encodes isoform 11.
    Source sequence(s)
    AC020915
    Related
    ENSP00000498814.1, ENST00000652201.1
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  36. NM_001387409.1NP_001374338.1  zinc finger protein 544 isoform 11

    Status: VALIDATED

    Description
    Transcript Variant: This variant (37), as well as variants 17-20 and 36, encodes isoform 11.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  37. NM_001387410.1NP_001374339.1  zinc finger protein 544 isoform 12

    Status: VALIDATED

    Description
    Transcript Variant: This variant (38) encodes the longest isoform (12). Variants 38 and 39 both encode the same isoform (12).
    Source sequence(s)
    AC020915
    Conserved Domains (4) summary
    smart00349
    Location:68127
    KRAB; krueppel associated box
    COG5048
    Location:460753
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:548568
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:424445
    zf-H2C2_2; Zinc-finger double domain
  38. NM_001387413.1NP_001374342.1  zinc finger protein 544 isoform 12

    Status: VALIDATED

    Description
    Transcript Variant: This variant (39) encodes the longest isoform (12). Variants 38 and 39 both encode the same isoform (12).
    Source sequence(s)
    AC020915
    Conserved Domains (4) summary
    smart00349
    Location:68127
    KRAB; krueppel associated box
    COG5048
    Location:460753
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:548568
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:424445
    zf-H2C2_2; Zinc-finger double domain
  39. NM_001387415.1NP_001374344.1  zinc finger protein 544 isoform 13

    Status: VALIDATED

    Source sequence(s)
    AC020915
    Conserved Domains (4) summary
    smart00349
    Location:153
    KRAB; krueppel associated box
    COG5048
    Location:386679
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:474494
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:350371
    zf-H2C2_2; Zinc-finger double domain
  40. NM_001387416.1NP_001374345.1  zinc finger protein 544 isoform 14

    Status: VALIDATED

    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:68127
    KRAB; krueppel associated box
  41. NM_001387417.1NP_001374346.1  zinc finger protein 544 isoform 15

    Status: VALIDATED

    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:68127
    KRAB; krueppel associated box
  42. NM_001387418.1NP_001374347.1  zinc finger protein 544 isoform 16

    Status: VALIDATED

    Description
    Transcript Variant: This variant (43), as well as variant 44, encodes isoform 16.
    Source sequence(s)
    AC020915
    Related
    ENSP00000470843.1, ENST00000595981.5
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  43. NM_001387419.1NP_001374348.1  zinc finger protein 544 isoform 16

    Status: VALIDATED

    Description
    Transcript Variant: This variant (44), as well as variant 43, encodes isoform 16.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  44. NM_001387420.1NP_001374349.1  zinc finger protein 544 isoform 17

    Status: VALIDATED

    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:68107
    KRAB; krueppel associated box
  45. NM_001387421.1NP_001374350.1  zinc finger protein 544 isoform 18

    Status: VALIDATED

    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  46. NM_001387422.1NP_001374351.1  zinc finger protein 544 isoform 19

    Status: VALIDATED

    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  47. NM_001387423.1NP_001374352.1  zinc finger protein 544 isoform 20

    Status: VALIDATED

    Description
    Transcript Variant: This variant (48), as well as variants 49 and 50, encodes isoform 20.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  48. NM_001387424.1NP_001374353.1  zinc finger protein 544 isoform 20

    Status: VALIDATED

    Description
    Transcript Variant: This variant (49), as well as variants 48 and 50, encodes isoform 20.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  49. NM_001387425.1NP_001374354.1  zinc finger protein 544 isoform 20

    Status: VALIDATED

    Description
    Transcript Variant: This variant (50), as well as variants 48 and 49, encodes isoform 20.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  50. NM_001387426.1NP_001374355.1  zinc finger protein 544 isoform 21

    Status: VALIDATED

    Description
    Transcript Variant: This variant (51), as well as variants 52 and 53, encodes isoform 21.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  51. NM_001387427.1NP_001374356.1  zinc finger protein 544 isoform 21

    Status: VALIDATED

    Description
    Transcript Variant: This variant (52), as well as variants 51 and 53, encodes isoform 21.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  52. NM_001387428.1NP_001374357.1  zinc finger protein 544 isoform 21

    Status: VALIDATED

    Description
    Transcript Variant: This variant (53), as well as variants 51 and 52, encodes isoform 21.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  53. NM_001387429.1NP_001374358.1  zinc finger protein 544 isoform 22

    Status: VALIDATED

    Description
    Transcript Variant: This variant (54), as well as variants 55-57, encodes isoform 22.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  54. NM_001387431.1NP_001374360.1  zinc finger protein 544 isoform 22

    Status: VALIDATED

    Description
    Transcript Variant: This variant (55), as well as variants 54, 56, and 57, encodes isoform 22.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  55. NM_001387432.1NP_001374361.1  zinc finger protein 544 isoform 22

    Status: VALIDATED

    Description
    Transcript Variant: This variant (56), as well as variants 54, 55, and 57, encodes isoform 22.
    Source sequence(s)
    AC020915
    Related
    ENSP00000468975.1, ENST00000597240.5
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  56. NM_001387433.1NP_001374362.1  zinc finger protein 544 isoform 22

    Status: VALIDATED

    Description
    Transcript Variant: This variant (57), as well as variants 54-56, encodes isoform 22.
    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
  57. NM_001387434.1NP_001374363.1  zinc finger protein 544 isoform 23

    Status: VALIDATED

    Source sequence(s)
    AC020915
    Related
    ENSP00000471452.1, ENST00000596677.5
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  58. NM_001387435.1NP_001374364.1  zinc finger protein 544 isoform 24

    Status: VALIDATED

    Source sequence(s)
    AC020915
    Related
    ENSP00000490395.1, ENST00000637233.1
    Conserved Domains (1) summary
    smart00349
    Location:1453
    KRAB; krueppel associated box
  59. NM_001387436.1NP_001374365.1  zinc finger protein 544 isoform 25

    Status: VALIDATED

    Source sequence(s)
    AC020915
    Conserved Domains (1) summary
    cl02581
    Location:1442
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
  60. NM_014480.4NP_055295.2  zinc finger protein 544 isoform 1

    See identical proteins and their annotated locations for NP_055295.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes isoform 1. Variants 1-3 and 21-23 all encode the same isoform (1).
    Source sequence(s)
    AK291656, AL833618, BC067271, DA193549
    Consensus CDS
    CCDS12973.1
    UniProtKB/Swiss-Prot
    Q6NX49
    Related
    ENSP00000469635.1, ENST00000596652.5
    Conserved Domains (4) summary
    smart00349
    Location:1473
    KRAB; krueppel associated box
    COG5048
    Location:406699
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:494514
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:370391
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    58228594..58277497
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024451453.1XP_024307221.1  zinc finger protein 544 isoform X2

    Related
    ENSP00000469514.1, ENST00000599953.1
    Conserved Domains (3) summary
    COG5048
    Location:264557
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:352372
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:228249
    zf-H2C2_2; Zinc-finger double domain
  2. XM_017026600.1XP_016882089.1  zinc finger protein 544 isoform X4

  3. XM_017026601.1XP_016882090.1  zinc finger protein 544 isoform X5

  4. XM_017026605.1XP_016882094.1  zinc finger protein 544 isoform X9

    Conserved Domains (1) summary
    smart00349
    Location:68107
    KRAB; krueppel associated box
  5. XM_017026602.1XP_016882091.1  zinc finger protein 544 isoform X6

  6. XM_017026604.1XP_016882093.1  zinc finger protein 544 isoform X8

RNA

  1. XR_001753665.2 RNA Sequence

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