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ZBTB11 zinc finger and BTB domain containing 11 [ Homo sapiens (human) ]

Gene ID: 27107, updated on 19-May-2018
Official Symbol
ZBTB11provided by HGNC
Official Full Name
zinc finger and BTB domain containing 11provided by HGNC
Primary source
HGNC:HGNC:16740
See related
Ensembl:ENSG00000066422 Vega:OTTHUMG00000159133
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ZNF913; ZNF-U69274
Expression
Ubiquitous expression in bone marrow (RPKM 8.1), testis (RPKM 5.9) and 25 other tissues See more
Orthologs
See ZBTB11 in Genome Data Viewer
Location:
3q12.3
Exon count:
13
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 3 NC_000003.12 (101649439..101677144, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (101368283..101395988, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ribosomal protein L32 pseudogene 7 Neighboring gene RNA, U6 small nuclear 1256, pseudogene Neighboring gene RNA, Ro-associated Y1 pseudogene 12 Neighboring gene ZBTB11 antisense RNA 1 Neighboring gene endogenous retrovirus group K member 5 Gag polyprotein Neighboring gene ribosomal protein L24

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • FLJ13426, MGC133303

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
RNA polymerase II transcription factor activity, sequence-specific DNA binding ISA
Inferred from Sequence Alignment
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleoplasm IDA
Inferred from Direct Assay
more info
 
Preferred Names
zinc finger and BTB domain-containing protein 11

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_014415.3NP_055230.2  zinc finger and BTB domain-containing protein 11

    See identical proteins and their annotated locations for NP_055230.2

    Status: VALIDATED

    Source sequence(s)
    AB208862, AI636025, AK312859, BC028062, DA907277
    Consensus CDS
    CCDS2943.1
    UniProtKB/Swiss-Prot
    O95625
    UniProtKB/TrEMBL
    Q59H97
    Related
    ENSP00000326200.4, OTTHUMP00000214139, ENST00000312938.4, OTTHUMT00000353441
    Conserved Domains (4) summary
    smart00225
    Location:215306
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:681701
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:204305
    BTB; BTB/POZ domain
    pfam13465
    Location:900923
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p12 Primary Assembly

    Range
    101649439..101677144 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011512689.2XP_011510991.1  zinc finger and BTB domain-containing protein 11 isoform X1

    Conserved Domains (4) summary
    smart00225
    Location:150241
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:616636
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:139240
    BTB; BTB/POZ domain
    pfam13465
    Location:835858
    zf-H2C2_2; Zinc-finger double domain
  2. XM_011512690.2XP_011510992.1  zinc finger and BTB domain-containing protein 11 isoform X2

    Conserved Domains (2) summary
    sd00017
    Location:397417
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:616639
    zf-H2C2_2; Zinc-finger double domain
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