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HHBVgp3 polymerase [ Heron hepatitis B virus ]

Gene ID: 2703545, updated on 8-Sep-2020

Summary

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Gene symbol
HHBVgp3
Gene description
polymerase
Locus tag
HHBVgp3
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Heron hepatitis B virus
Lineage
Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Blubervirales; Hepadnaviridae; Avihepadnavirus
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Genomic context

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Sequence:
NC_001486.1 (170..2536)

NC_001486.1Genomic Context describing neighboring genes Neighboring gene core antigen Neighboring gene core antigen Neighboring gene small surface antigen Neighboring gene large surface antigen Neighboring gene core antigen Neighboring gene core antigen

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001486.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Isolation and characterization of a hepatitis B virus endemic in herons. Sprengel R, et al. J Virol, 1988 Oct. PMID 3418788, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

misc_binding

  • Loc: 2220-2237 bound_moiety = nuclear factor

Miscellaneous features

  • Loc: 380-530 reverse transcriptase domain
  • Loc: 662-750 RNAse H domain

General protein information

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Preferred Names
polymerase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001486.1 Reference assembly

    Range
    170..2536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_040998.1 polymerase [Heron hepatitis B virus]

    See identical proteins and their annotated locations for NP_040998.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P13846
    Conserved Domains (3) summary
    pfam00242
    Location:78 → 327
    DNA_pol_viral_N; DNA polymerase (viral) N-terminal domain
    pfam00336
    Location:573 → 763
    DNA_pol_viral_C; DNA polymerase (viral) C-terminal domain
    cl02808
    Location:429 → 565
    RT_like; RT_like: Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P13846.1

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