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MGG_06400 nuclear and cytoplasmic polyadenylated RNA-binding protein pub1 [ Magnaporthe oryzae 70-15 ]

Gene ID: 2684555, updated on 13-Aug-2016

Summary

Gene symbol
MGG_06400
Gene description
nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
Locus tag
MGG_06400
Gene type
protein coding
RNA name
nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
RefSeq status
PROVISIONAL
Organism
Magnaporthe oryzae 70-15 (strain: 70-15, old-name: Magnaporthe grisea 70-15)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Magnaporthales; Magnaporthaceae; Magnaporthe

Genomic context

Location:
chromosome: 4
Exon count:
6
Sequence:
Chromosome: 4; NC_017851.1 (3862385..3866191)

Chromosome 4 - NC_017851.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene cellulase Neighboring gene hypothetical protein Neighboring gene CMGC/DYRK/YAK protein kinase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

General gene information

Homology

  • Homologs of the MGG_06400 gene: The MGG_06400 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, zebrafish, S.cerevisiae, K.lactis, E.gossypii, M.oryzae, N.crassa, and frog.
  • Orthologs

General protein information

Names
nuclear and cytoplasmic polyadenylated RNA-binding protein pub1

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_017851.1 Reference assembly

    Range
    3862385..3866191
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003717122.1XP_003717170.1  nuclear and cytoplasmic polyadenylated RNA-binding protein pub1 [Magnaporthe oryzae 70-15]

    See identical proteins and their annotated locations for XP_003717170.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G4N7J4
    Conserved Domains (4) summary
    cd12614
    Location:87160
    RRM1_PUB1; RNA recognition motif 1 in yeast nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 and similar proteins
    cd12619
    Location:177251
    RRM2_PUB1; RNA recognition motif 2 in yeast nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 and similar proteins
    TIGR01661
    Location:84376
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cl17169
    Location:302375
    RRM_SF; RNA recognition motif (RRM) superfamily
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